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SNPs in Medical News

WaferGen and Leading Academic Medical Center Establish Genotyping Research Collaboration to Validate SNPs in Breast Cancer Using SmartChip(TM) Real-Time PCR System

FREMONT, Calif., April 28 /PRNewswire-FirstCall/ -- WaferGen Biosystems, Inc. (OTC Bulletin Board: WGBS), a leading developer of state-of-the-art genetic analysis systems, today announced the signing of a research collaboration with Duke University Medical Center scientists for WaferGen's SmartC...

QMed, Inc. Comments on Estimated 3rd Quarter Results & Medical Expense Ratio; Sets 2008 Revenue Guidance for Medicare SNPs at $88-95 Million

EATONTOWN, N.J., Sept. 27 /PRNewswire-FirstCall/ -- QMed, Inc., (Nasdaq: QMED ) today announced it expects to report for the three and nine months ending August 31, 2007 revenue of approximately $10.8 million and $26.6 million and a net loss of approximately $9.2 and $13 million respectively....

Gene linked to increasingly common type of blood cancer

...studies would be needed to determine the biological importance of other STG snps linked to rs6457327 that might change the function of the gene. This could ...lowed them to screen more than 500,000 SNPs. The nearly 90 most significant snps were then genotyped to more closely examine their association with lymphoma...

New Map of Genomic Variation Will Enable Disease Research

... are larger variations in DNA structure. As changes to a single DNA letter, snps might be considered misspellings or alternate spellings of a word, while CN...ome CNVs are inserted stretches of DNA from other parts of the genome. Both snps and CNVs contribute to genetic diversity and disease by changing the action...

The GenoMEL project identifies a new region of the genome associated with the risk of melanoma

...leotides that make up DNA and can be associated with many genetic diseases. The study published in Nature Genetics performs an exhaustive search for snps in a broad population sample. The study enrolled 4336 control subjects and 1650 patients with melanoma and probable unknown genetic susceptibility. Th...

TGen and USC researchers find genetic markers to help fight diabetes

...dentify other variants that predict response to TZDs, TGen researchers performed a genome-wide analysis of 115,352 single nucleotide polymorphisms, or snps (a DNA sequence variation within the more than 3 billion base pairs in the human genome). In addition, the scientists also systematically screened 28 ...

Genomas Presents Drug-Specific Genetic Determinants of Statin Safety and Efficacy at the XV International Symposium on Atherosclerosis

...astatin were studied in lipid clinics at Hartford Hospital (Hartford, CT) and the University of California, San Francisco . Researchers genotyped 384 snps (single nucleotide polymorphisms) from 222 cardiometabolic and neuroendocrine genes with a potential role in determining the safety and efficacy of st...

Researchers at Case Western Reserve discover a new way the body fights fungal infection

...lated genes, called single nucleotide polymorphisms or SNPs, affect susceptibility to fungal and other infections. "If we can identify patterns of snps that make people more likely to develop life-threatening fungal infections, it may be possible in the future to use these as markers to screen patient...

Interleukin Genetics to Present Research Linking Perilipin Genes to Diet Response at the ADA Annual Meeting

...es to possible clinical utility in optimal weight-loss programs for the obese/overweight population. Interleukin Genetics genotyped a panel of 23 snps within genes involved in fat and carbohydrate metabolism in the study subjects who had consented for genetic analysis. A linear regression model that ...

Mayo researchers help discover genetic cause for primary biliary cirrhosis

...es between the patients with primary biliary cirrhosis and the control group," says Dr. Lazaridis. As a result, researchers narrowed their focus to 16 snps significantly linked to primary biliary cirrhosis. In phases two and three, researchers conducted "replication" and "fine-mapping" studies to confi...
SNPs in Medical Technology

deCODE Discovers Second Common Genetic Risk Factor for Atrial Fibrillation and Stroke

...gram to build on this work and to find new risk variants. After expanding their genome-wide association study in Iceland, the deCODE team took the top snps outside the 4q25 region and typed them in case-control cohorts from Iceland, Norway and the United States. This confirmed the ZFHX3 SNP as a risk vari...

deCODE-led Megastudy Finds New Genetic Clues to Causes of Schizophrenia

...in the online edition of Nature. One of the snps is located near the neurogranin gene (NRGN) on chr...hich is involved in brain development. Five of the snps are located very closely together in the Major His... conducted a genome-wide scan of more than 300,000 snps in a total of 17,000 patients and controls from En...

ADHD Genes Found; Known to Play Roles in Neurodevelopment

... Hospital of Philadelphia. The study appeared online today in the journal Molecular Psychiatry . Unlike changes to single DNA bases, called snps or "snips," the alterations examined in the current study are broader changes in structure. Called copy number variations (CNVs), they are missing or ...

Mayo Researchers Help Discover Genetic Cause for Primary Biliary Cirrhosis

...es between the patients with primary biliary cirrhosis and the control group," says Dr. Lazaridis. As a result, researchers narrowed their focus to 16 snps significantly linked to primary biliary cirrhosis. In phases two and three, researchers conducted "replication" and "fine-mapping" studies to con...

St. Jude Finds More Than 100 Gene Variations Linked With Response to Leukemia Treatment

...esearchers performed a search of 476,796 inherited snps from two independent groups of children with newly... A high proportion (21 of 102) of these MRD-linked snps also predicted leukemic relapse; moreover, 21 snps linked eradication of MRD with greater exposure of...

A Milestone in Cancer Genetics: deCODE Discovers First Common Genetic Variants Affecting the Risk of Many Types of Cancer

...scoveries by scientists around the world of common snps conferring risk of many major types of cancer. Yet without exception, these snps have been linked to cancer of only one or at most two tissue types or organs. The snps published today, located near each other on chromo...

Major deCODE-led Study Underscores Role of the Brain in Obesity

...IANT Consortium. deCODE is incorporating the novel snps on chromosomes 1, 2, 3, 6, 11, 12 and 19 reported ...study published today correlated more than 300,000 snps with data on weight and body mass index (BMI). BMI...GIANT Consortium's research. This analysis yielded snps linked to overweight and obesity at seven regions ...

deCODE and SGENE Consortium Discover Deletions in the Human Genome Linked to Risk of Schizophrenia

...se conditions than in others. SNP-chips are not well suited to finding rare snps but can, with sufficiently large sample sizes, be used to identify deletion...ne discovery programs and who had been genotyped with the more than 300,000 snps on the HumanHap300 chip. The deCODE team discovered 66 de novo CNVs, that i...

Data Presented at the American Psychiatric Association (APA) Annual Meeting Demonstrate Iloperidone's Efficacy and Safety, With Low Rates of Movement and Metabolic Adverse Events

...edictive value were seen with rs9643483 (XKR4) with a change from baseline to endpoint PANSS-T score of -15.02 (p=0.00017) -- None of the six snps was significantly associated with response to ziprasidone The combination of six markers defined several groups of patients with different proba...

Karmanos Cancer Institute Research Supports Role of Inflammation to Determine Lung Cancer Risk, Particularly in African-American Women

...h/20071106/KARMANOSCANCERINSTITUTELOGO ) The abstract titled, Cytokine snps Differentially Predict Risk of Non Small Cell Lung Cancer in African Americ...ese results suggest racial differences in the relationship between cytokine snps and risk of lung cancer, but larger studies need to be conducted in diverse...
SNPs in Medical Products

NanoChip 400 System

Features:... Customizable 400-Site Microarray Easy to Design and Optimize Multiplexed Panels Robustly Interrogates Adjacent snps Multiple Samples per Array Walk-away Automation...
Company:Nanogen, Inc.
SNPs in Biological News

Pooled data examines if SNPs add to breast cancer risk

Pooling data from numerous studies has helped scientists examine specific genetic variants related to breast cancer incidence, according to a study in the October 4 issue of the Journal of the National Cancer Institute. The Breast Cancer Association Consortium brought together data from more ...

Identification of genetic variants affecting age at menopause could help improve fertility treatment

...n four different places on chromosomes 19 and 20. snps are common genetic variants that influence how hum...ith a particular disease or characteristic. The snps the researchers found had not been identified befo... in the ovaries or brain. "We found that the 20 snps were all related to a slightly earlier menopause",...

Immune genes adapt to parasites

...s. In the new study, Matteo Fumagalli and colleagues sift through 1,052 snps in genes that code for immune proteins called interleukins from roughly 100...ore by the diversity of viruses, bacteria, and fungi than by that of worms. snps in some of these genes are known risk alleles for inflammatory bowel diseas...

Researchers gain genome-wide insights into patterns of the world's human population structures

...ons. The UW researchers applied this method to a data set of almost 650,000 snps (pronounced "snips"). A single nucleotide polymorphism is a genetic var... sequence from two individuals of the same species. The data set of 650,000 snps came from 944 unrelated persons representing 52 broadly classified populati...

Tiny differences in our genes help shed light on the big picture of human history

...elied on the frequency patterns of individual SNPs, while ignoring the patterns of specific groups of SNPs. This work shows that looking at groups of snps helps us better understand what happened long before there was a human historical record. "When we think of the past, we often think in terms of t...

Bovine genome provides clues to possible new developments

...or changes called single nucleotide polymorphisms snps markers that can help researchers identify favora...ame out of the SNP project was the resource of the snps themselves," said Dr. Clare Gill, a Texas AgriLife...tation and 13 research centers across the state. snps in 497 cattle from 17 geographically and biologica...

New therapeutic strategy could target toxic protein in most patients with Huntington's disease

...ld share the same polymorphisms, making drug development and testing nearly -- if not completely -- impossible. Then they got lucky. The search for snps in the genetic material of 109 Huntington patients uncovered a single SNP carried by 48 percent of people with Huntington's. "This SNP is actually ass...

Altered gene can increase risk of schizophrenia

...e PPLD was really helpful in sorting the evidence. It showed that of the 60 snps we were evaluating, three had a much higher probability of association with...e, which greatly simplified this next step." Each of the three candidate snps was introduced into separate cultures of identical cloned cells derived fro...

Changes in gene may stunt lung development in children

... mutations in children ages 9 to 11 by testing for snps linked to lung function. After analyzing DNA from ...nd Allergy in Children, they discovered two common snps associated with poorer lung function. One of these snps likely alters the expression levels of SOD3. Lung ...

Genetic irregularities linked to higher risk of COPD among smokers

...ready been associated with lung cancer and other respiratory disorders. The snps also appeared with significant frequency among members of the international...etics and emphysema groups. "We believe that smokers who have these two snps face a nearly two-fold increase in risk of developing COPD, when compared w...
SNPs in Biological Technology

Data on WaferGen's SmartChip(TM) System to be Presented at 3rd Annual Rediscovering Biomarkers Conference

...m is the validation of single-nucleotide polymorphisms (SNPs) that are related to breast cancer, as well as an examination of the impact the validated snps have on patients' disease prognosis and response to treatment. About the SmartChip Real-Time PCR System The SmartChip Real-Time PCR S...

It's Not Just the Sun: deCODE Discovers Sequence Variants Affecting Susceptibility to Skin Cancer

...ation in sunlight. By contrast, three of the snps presented today do not correlate with light pigmen... are at more than 50% greater risk. Another of the snps is located on chromosome 9p21, the same region of ...s BCC. The study involved three stages. First, the snps with the best results from previous genome-wide sc...

febit First to Offer Newly Published Mouse Genome on a Chip for DNA/RNA Detection and Enrichment

...biochip on the market covering the newly published whole mouse genome. The biochip from febit enables up-to-date profiling and enrichment of genes and snps of interest using Gene Expression Profiling, SNP-Detection, ncRNA analysis as well as targeted enrichment of genes for Next-Generation Sequencing (NGS...

deCODE Study Shows Complex Interplay of the Human Biological Clock With Height, Weight and Disease

...both genetic and environmental factors, though the snps reported today are the first genetic factors to be.... Through the analysis of more than 300,000 snps across the genomes of more than 15,000 Icelandic w...Dutch women, the deCODE team identified two common snps on chromosome 6q21 that are associated with betwee...

deCODE genetics Announces First Quarter 2009 Financial Results

...iovascular and metabolic diseases, including heart attack, stroke, atrial fibrillation (AF) and type 2 diabetes (T2D). The markers include snps discovered by deCODE on chromosome 9p21 linked to increased risk of heart attack and types of aneurysm, on chromosome 4q25 conferring risk...

deCODE and Celera Partner to Expand use of deCODE Risk Markers for Heart Attack, Stroke and Diabetes

...ncreased risk of heart attack and aortic aneurysm, snps on chromosome 4q25 conferring risk of AF and strok... Individuals who carry two copies of the at-risk snps on chromosome 9p21 are at an approximately 60% gre... for their patients(2). Carrying two copies of the snps on 4q25 correlates to both an increased risk of st...

Discovery of a new retinal gene involved in childhood blindness

... negative for this detailed screen are then subjected to a second DNA chip, this one to identify significant stretches of homozygosity in SNP markers. snps are single nucleotide repeats, which are natural variations in the human genome. These homozygous regions may contain new genes and are carefully prob...

Pigs to Be Genotyped to Improve Selection and Breeding for Pancreatic Islet Cell Research

...e agribusiness, food safety, biomedical and pharmaceutical markets. GeneSeek's high throughput genotyping capabilities range from one SNP to a million snps per sample and are relevant to gene discovery, diagnostic testing, marker-assisted breeding and identity management across many species. www.GeneSeek...

Multinational deCODE Study Identifies New Link Between Inflammation and Heart Attack

...role of eosinophils in asthma, the deCODE team also analyzed the eosinophil snps in more than 50,000 asthmatics and healthy control subjects from the countr...romosome 2q12 was associated with increased risk of asthma, and three other snps were associated with risk of atopic asthma. "This is a great example...

23andMe and mondoBIOTECH Partner to Advance Research of Rare Diseases

...eading technology for genome-wide association studies and has the unique capability to include custom markers. This feature enabled 23andMe to select snps (single nucleotide polymorphisms), or variants that provide coverage of genes associated with drug response, information that is proving to be critica...
SNPs in Biological Products

GenomeLab SNPstream Genotyping System from Beckman Coulter

Description:...,600 to over 3 Million genotypes per day. Part of the GenomeLab family of products*, this automated, scalable, multiplexed system can process up to 48 snps in each well of an arrayed 384-well plate, for cost-effective high throughput SNP analysis. Based on single-based primer extension reaction technology...
Company:Beckman Coulter

SeeSNP Discovery / Resequencing from Agencourt Bioscience

Description:...lied samples and sequence alignment and analysis. Agencourts SNP Discovery service provides for rapid and highly accurate identification of SNP loci. snps are identified using a targeted resequencing strategy, fueled by our capacity to sequence over 20 million Phred20 bases per day and our proprietary, f...
Company:Agencourt Bioscience
SNPs in Biological Definition

Polymerase chain reaction

...homozygous C, or heterzygous T/C. This methodology has several applications, such as amplifying certain haplotypes (when certain alleles at 2 or more snps occur together on the same chromosome [Linkage Disequilibrium]) or detection of recombinant chromosomes and the study of meiotic recombination. ...
SNPs in Biological Dictionary

Sequence Polymorphism

... one allele but missing in the other, this can prevent ... A Single Nucleotide Polymorphism , or SNP (pronounced "snip"), is a small genetic ... snps found within a coding sequence are of particular interest to researchers ... A cross-reference to the reference sequence this polymorphism is...

Polymorphisms

...m, and Human Genome Project SNP ... Single nucleotide polymorphisms , or snps (pronounced "snips"), are DNA sequence ... Posted in Polymorphisms , ...ducts in the ... Polymorphisms ... Single Nucleotide Polymorphisms - snps - SNP genotyping information and resources available for pharmacogenomics -...

Overlapping clones

...lones of chromosomes 2 (4) and 4 (5) ... If the overlapping clones sequenced are from different lineages, one is ... Results of Analyzing 68 snps Found in 3 Overlapping Clones ... (b) Constructing an Overlapping Clone Library. ... libraries of clones containing partly overlapping r...

Nucleotide

...mputing dictionary. nucleotides Fact sheet about SNPs, the SNP Consortium, and Human Genome Project SNP ... Single nucleotide polymorphisms, or snps (pronounced "snips"), are DNA sequence ... A nucleotide is an organic molecule consisting of a heterocyclic nucleobase (a ... Nucleotide na...

Linkage disequilibrium

...of linkage disequilibrium . ... To model linkage disequilibrium , MERLIN organizes markers into clusters. ... This file describes clusters of snps in linkage disequilibrium . ... Linkage Disequilibrium . If all polymorphisms were independent at ... Linkage disequilibrium makes tigh...

Haplotype

...e up to 80%, buy or rent. New and used books like Computational Methods for snps and Haplotype Inference 2nd edition by... Online Shopping at SpotCost.com - New and used books like Computational Methods for snps and Haplotype Inference 2nd edition by from Springer ISBN-10: 3-540-21249...

Flanking region

...C flanking region from one virus with the counterpart ... ISHS IX International Conference on Grape Genetics and Breeding CHARACTERIZATION OF snps FROM MICROSATELLITE FLANKING REGIONS IN VITIS Exon 1: 13 sequences from 6 species with flanking regions and splice-typing . The 5'- flank...

Autosomes

...e HuRef Autosomes Compared to HuRef X and Y Chromosomes ... Diversity for snps and Indels in Autosomes ... I. Differential accumulation of hybrid m...of HMS factors as the autosomes . ... ... and analyzing at least 48,000 snps covering all the 29 bovine autosomes and ... autosomes and the X-chromo...

Allele-specific PCR

...ecific colony PCR . Identification of ... A combination of PCR amplification with allele - specific hybridization in a ... Detection of snps by allele - specific PCR , also known as the amplification ... ...
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