Protei

Quantum Dots Research Leads to New Knowledge about Protein Binding in Plants

UC Riverside researchers from the Departmentsof Chemical and Environmental Engineering, Mechanical Engineering andBotany and Plant Sciences have worked together to discover a way toutilize to uncover new knowledge about the binding of a protein at the growingpollen tube tip. This protein plays a critic...

Protein discovery could unlock the secret to better TB treatment

UCL scientists have found a protein that could unlock the secret to quicker, more effective treatment of TB by waking TB bacteria in the body. Once the TB bacteria are active again, the disease becomes treatable using common drugs like antibiotics. Scientists believe that uncovering the molecular structure of this protein will lead the way to designing drugs which enable treatment of dormant and...

New, automated tool successfully classifies and relates proteins in unprecedented way

For the first time, researchers haveautomatically grouped fluorescently tagged proteins fromhigh-resolution images of cells. This technical feat opens a new way toidentify disease proteins and drug targets by helping to show whichproteins cluster together inside a cell.The approach, developed by Carnegie Mellon University, outperformsexisting visual methods to localize proteins inside cells...

New binding target for oncogenic viral protein

The DNA tumor virus simian virus 40 produces the Large T antigen which inactivates two of the cell's most important cancer-preventing proteins, p53 and pRb. In a study published in the Journal of Biological Chemistry, researchers at the Fred Hutchinson Cancer Research Center report the discovery of an additional target for T antigen--a protein called Fbw7. The Fbw7 gene is located in a ch...

Controversial drug shown to act on brain protein to cut alcohol use

Medicationagainst nicotine addiction is nowadays readily available. However, asimilar and equally dangerous addiction, alcoholism, can't yet becontrolled by drugs. Or can it be? Researchers from the University ofCalifornia in San Diego identified a natural compound able to blockalcohol addiction in rodents. We can only hope that anti-alcoholismpatchs or gum...

Timing is everything: First step in protein building revealed

Timing is everything, it seems, even inscience. A team led by Johns Hopkins scientists has unraveled the firststep in translating genetic information in order to build a protein,only to find that it's not one step but two.In a series of experiments, the scientists found that when yeast'sprotein-building machinery recognizes the starting line for a gene'sinstructions, it first alters its str...

UW's Rosetta software to unlock secrets of many human proteins

University of Washington TechTransferrecently licensed software that will give scientists a huge advantagein the fight against disease.The software, known as Rosetta, predicts how proteins fold, informationthat is highly valuable to biological and biomedical researchers.UW Tech Transfer's Digital Ventures licensed Rosetta software withoutcharge to the Institute for Systems Biology (ISB), a...

Researchers find how protein allows insects to detect and respond to pheromones

University of Washington TechTransferrecently licensed software that will give scientists a huge advantagein the fight against disease.The software, known as Rosetta, predicts how proteins fold, informationthat is highly valuable to biological and biomedical researchers.UW Tech Transfer's Digital Ventures licensed Rosetta software withoutcharge to the Institute for Systems Biology (ISB), a...

Researchers Uncover Key Step In Manufacture of Memory Protein

A cellular enzyme appears to play a crucial role in the manufacture of a protein needed for long-term memory, according to a team of researchers led by scientists at the National Institute of Child Health and Human Development of the National Institutes of Health. The protein is known as mBDNF, which stands for mature brain-derived neurotrophic factor. In an earlier study, another team of...

Signaling protein builds bigger, better bones in mice

In a new study, researchers present a “cautionary tale?about what may go wrong when using the fledgling science of proteomics to devise a diagnostic test for cancer. In the February 16 issue of the Journal of the National Cancer Institute, researchers from The University of Texas M. D. Anderson Cancer Center detail why an experimental test intended to identify early ovarian cancer from a...

Ancient olfaction protein is shared by many bugs, offering new pest control target

In the battle against insect pests, new research indicates that it may all come down to the sense of smell. A group of Rockefeller University scientists who had previously identified a key gene essential for the sense of smell in fruit flies now shows that this gene's function appears to be evolutionarily conserved across very different insect species. Research by Leslie Vosshall's laborat...

An HIV Protein Plays a Surprising Role in Gene Activation

Retroviruses are expert manipulators when it comes to co-opting their host's cellular resources. A great deal of human complexity stems from the vast repertoire of proteins and mechanisms dedicated to the business of regulating gene expression, and retroviruses like HIV have evolved myriad ways of redirecting that machinery to their own benefit. Humans and other eukaryotes have three type...

Automatic extraction of gene/protein biological functions from biomedical text

With the rapid advancement of biomedical science and the development of high-throughput analysis methods, the extraction of various types of information from biomedical text has become critical. Since automatic functional annotations of genes are quite useful for interpreting large amounts of high-throughput data efficiently, the demand for automatic extraction of information related to gene func...

Protein Packages Found To Activate Genes; May Be What Regulates Development And Disease

It's all in the packaging. How nature wraps and tags genes determines if and when they become active, according to researchers from Harvard and the Massachusetts Institute of Technology (M.I.T.). They did the largest, most detailed study to date of the protein structure that surrounds the human genome. Their findings reveal surprising and previously unknown specifics of how genes get switc...

Discovery of key protein's shape could lead to improved bacterial pneumonia vaccine

Scientists at St. Jude Children's ResearchHospital have discovered that the shape of a protein on the surface ofpneumonia bacteria helps these germs invade the human bloodstream. Thisfinding, published Dec. 16 online by the EMBO Journal, could helpscientists develop a vaccine that is significantly more effective atprotecting children against the disease. The St. Jude researchersdetermined t...

Scientists develop new color-coded test for protein folding

Every protein--from albumin to testosterone --is folded into a unique, three-dimensional shape that allows it to function properly. Now Stanford University scientists have developed a simple test that instantly changes color when a protein molecule attached to a gold nanoparticle folds or unfolds. The new technique, which works on the sa...

New SARS Protein Linked To Important Cell Doorway

As public health officials in China brace for a potential resurgence in SARS (Sudden Acute Respiratory Syndrome) in connection with Chinese New Year on February 9, researchers at Washington University in St. Louis have published insights into a new protein that could be an important contributor to the SARS virus' ability to cause disease and death. When the SARS virus first jumped from it...

New protein discovered by Hebrew University researchers

Researchers at the Hebrew University ofJerusalem have succeeded in discovering and isolating a new proteinfrom the poplar tree with special structural and qualitativecharacteristics that could have consequences for development of futurenanocapsules for drug delivery to cancer cells.In addition to being obtained from plant tissue, the protein can nowalso be produced in large quantities as a...

The Shapes Of Life: NIGMS Project Yields More Than 1,000 Protein Structures

The Protein Structure Initiative (PSI), a national program aimed at determining the three-dimensional shapes of a wide range of proteins, has now determined more than 1,000 different structures. These structures will shed light on how proteins function in many life processes and could lead to targets for the development of new medicines. The PSI is a 10-year, approximately $600 million pr...

PANTHER Protein Classification System Database 5.0

PANTHER, a protein classification system fromApplied Biosystems, got updated to version 5.0. Proteins are classifiedby family, molecular and biological function (GO ontology) and knownpathways. Its main use is probably microarray analysis - it incorporateautomated GO surrepresentation analysis with graphical output. Best ofall, its available f...

Duke Chemists Isolating Individual Molecules Of Toxic Protein In Alzheimer's, Parkinson's Disease

To understand the formation of the brain-clogging deposits that cause such disorders as Alzheimer's and Parkinson's diseases, Duke University chemists have figured out how to capture and "micromanipulate" the single molecular building blocks of the deposits. Their aim is to understand the detailed assembly process for the toxic protein called amyloid plaque. Such basic understanding, they...

Newly Discovered Compound Blocks Known Cancer-Causing Protein

Duke Comprehensive Cancer Center scientists have discovered a potential new drug that inhibits destructive cell signals that drive the growth of one-third of all cancers. The scientists showed they could block the growth of cultured colon cancer cells using this new compound, called cysmethynil. Their finding, reported in the March 22, 2005, issue of Proceedings of the National Academy of...

UF Researchers Map Bacterial Proteins That Cause Tooth Loss

The human mouth teems with millions of enamel-eroding, gum-inflaming microbes. Now scientists have...

Scientists solve structure of key protein in innate immune response

When bacteria invade the body, a molecule called CD14 binds to substances liberated from the bacteria and initiates the cellular defense mechanisms. In a report published in the Journal of Biological Chemistry, scientists in Korea announced their elucidation of three-dimensional structure of CD14 and showed how it is perfectly suited to bind to certain bacterial products. The research appe...

Protein offers way to stop microscopic parasites in their tracks

Scientists may have found a way to throw a wrench in the transmissions of several speed demons of the parasite world. Researchers at Washington University School of Medicine in St. Louis and Harvard University have identified a protein that could help them develop drugs to stop or slow cell invasion by malaria and other parasites known as apicomplexans. Results of the study will appear in...

Hirsute Or Hairless? Two Proteins May Spell The Difference

If you're a cat fancier, you're well aware that hair follicles are expendable. The product of a spontaneous mutation that caught a cat breeder's eye, le chat nu, would quickly succumb in the wild—its winter coat consists of little more than a ridge of fur down the midback and tail—and needs special care to thrive as a pet. Hairless animals in the lab, on the other hand, can be very instructive. U...

Epstein-Barr virus protein crucial to its role in blood cancers

Researchers at the University of Pennsylvania School of Medicine have identified a link between a critical cancer pathway and an Epstein-Barr Virus (EBV) protein known to be expressed in a number of EBV-associated cancers. Their findings demonstrate a new mechanism by which EBV transforms human B cells from the immune system into cancerous cells, which can lead to development of B-cell lymphomas....

Viral protein influences key cell-signaling pathway

New research shows that a protein produced by a cancer-causing virus influences a key signaling pathway in the immune cells that the virus infects. This stimulates the cells to divide, helping the virus spread through the body. T...

Controlling protein diversity

Proteins called coactivators control the process by which a single gene can initiate production of several proteins in a process called alternative splicing, said Baylor College of Medicine researchers in a report that appears in today's issue of the journal Molecular Cell. "A major question in biology today is how human cells with 30,000 genes produce at least 120,000 proteins," said Dr. Bert O'...

50-year-old Mystery Solved: Protein Tags Regulate Key Ion Channel

Researchers at the University of Chicago have found that a recently discovered biological process known as sumoylation -- until now thought to be active only in the nucleus -- also occurs near the cell's surface where it regulates at least one and possibly many kinds of proteins, providing a novel target for the development of new drugs. The discovery, published in the 8 April 2005 issue o...

New winter hulless barley has high protein

Virginia Tech's Small Grains Breeding Program is developing a new type of barley that lacks the fibrous covering. This new hulless barley offers producers an alternative grain for both traditional and new markets, including food, feed, and ethanol. The price for winter barley has declined since 1996. Even though winter barley was an integral component of the region's cropping system, growe...

Researchers identify protein crucial for survival of Lyme-disease bacterium

When the tick-borne bacterium that causes Lyme disease lacks a specific protein that responds to an incoming meal of blood, it is unable to be transmitted from the tick to a new animal host, researchers at UT Southwestern Medical Center have found. The findings suggest that the protein, called BptA, is essential for the bacterium Borrelia burgdorfei (Bb) to survive in the gut of its tick h...

Multi-purpose protein regulates new protein synthesis and immune cell development

A signaling protein called IRE1, which helps stressed-out cells make new proteins, may be more versatile and important than scientists believed. A new study by researchers from the University of Michigan Medical School and the Howard Hughes Medical Institute reveals the surprising finding that this same signaling protein is required for the formation of immune cells called B lymphocytes....

UCSD-Salk Team Show Protein’s Gene-Silencing Role In Development of Nervous System

The first evidence that a group of proteins called phosphatases play a key role in the development of the nervous system, has been shown in fruit flies and mice by researchers at the University of California, San Diego (UCSD) School of Medicine, in collaboration with scientists at the Salk Institute, La Jolla, California. The phosphatases are required for maintenance of neural stem cells and for...

Protein That Promotes Survival Of Stem Cells Might Be Key To Poor Leukemia Prognosis

The complex and life-sustaining series of steps by which hematopoietic stem cells (HSC) give rise to all of the body's red and white blood cells and platelets has now been discovered to depend in large part on a single protein called Mcl-1. This finding, from an investigator at St. Jude Children's Research Hospital, is published in the February 18 issue of Science. Mcl-1 blocks the biochem...

Global analysis of membrane proteins

All cells are encased within a protective lipid membrane. The membrane is studded with many hundreds of different proteins that transport nutrients, ions, and water into and out of the cell. Such membrane proteins also help cells recognize each other in the body, and make the nervous system work. Scientists at Stockholm University have now mapped out nearly all of the membrane proteins in the ent...

Protein helps regulate the genes of embryonic stem cells

New research from University of North Carolina at Chapel Hill shows how a protein may be crucial to the regulation of genes in embryonic stem cells. The protein, called "eed," is needed for an essential chemical modification of many genes. Embryos cannot survive without the modification. The findings appear in the May 24 issue of the journal Current Biology. The research offers an importan...

Protein Discovery Could Unlock The Secret To Better TB Treatment

UCL scientists have found a protein that could unlock the secret to quicker, more effective treatment of TB by waking TB bacteria in the body. Once the TB bacteria are active again, the disease becomes treatable using common drugs like antibiotics. Scientists believe that uncovering the molecular structure of this protein will lead the way to designing drugs which enable treatment of dormant and...

Protein prevents detrimental immune effects of bacterial sepsis

The anti-inflammatory protein annexin 1 may protect patients from the detrimental effects of severe inflammatory response syndrome, as reported by researchers at Barts and the London, Queen Mary's School of Medicine and Dentistry. The paper by Damazo et al., "Critical protective role for annexin 1 gene expression in the endotoxemic murine microcirculation," appears in the June issue of The Americ...

Oldest fossil human protein ever sequenced

An international team led by researchers at the Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology in Liepzig, Germany and Washington University in St. Louis, has extracted and sequenced protein from a Neanderthal from Shanidar Cave, Iraq dating to approximately 75,000 years old. This is the oldest fossil human protein ever sequenced. The research will be pu...