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New, automated tool successfully classifies and relates proteins in unprecedented way

For the first time, researchers haveautomatically grouped fluorescently tagged proteins fromhigh-resolution images of cells. This technical feat opens a new way toidentify disease proteins and drug targets by helping to show whichproteins cluster together inside a cell.The approach, developed by Carnegie Mellon University, outperformsexisting visual methods to localize proteins inside cells...

Genome of deadly amoeba shows surprising complexity, evidence of lateral gene transfer

The genome sequence of the parasitic amoeba Entamoeba histolytica, a leading cause of severe diarrheal disease in developing countries, includes an unexpectedly complex repertoire of sensory genes as well as a variety of bacterial-like genes that contribute to the organism's unique biology. The report, which appears in the February 24 issue of Nature, presents the first genome-wide study...

Study finds more than one-third of human genome regulated by RNA

For many years, DNA and proteins have beenviewed as the real movers and shakers in genomic studies, with RNA seenas little more than a messenger that shuttles information between thetwo. But researchers from Whitehead Institute for Biomedical Researchand Massachusetts Institute of Technology have discovered that smallRNA molecules called microRNAs regulate thousands of human genes--morethan...

NYU researchers simulate molecular biological clock

For many years, DNA and proteins have beenviewed as the real movers and shakers in genomic studies, with RNA seenas little more than a messenger that shuttles information between thetwo. But researchers from Whitehead Institute for Biomedical Researchand Massachusetts Institute of Technology have discovered that smallRNA molecules called microRNAs regulate thousands of human genes--morethan...

Yale Scientists Find MicroRNA Regulates Ras Cancer Gene

Research in the laboratory of Assistant Professor Frank J. Slack at Yale University has identified a new way that a familiar gene is regulated in lung cancer, presenting new possibilities for diagnosis and treatment. The work is reported in March issues of the journals Cell and Developmental Cell. The oncogene Ras is out of control in about 20 percent of cancers where it is over-expressed...

Poplar trees redirect resources in response to simulated attack

Scientists at the U.S. Department of Energy's Brookhaven National Laboratory have applied some of the same techniques used in medical imaging to track the distribution of nutrients in poplar trees in response to a simulated insect attack. The research provides new insights on a long-debated theory about how plants respond to environmental stress, and shows that radiotracer imaging can be a big he...

Protein Packages Found To Activate Genes; May Be What Regulates Development And Disease

It's all in the packaging. How nature wraps and tags genes determines if and when they become active, according to researchers from Harvard and the Massachusetts Institute of Technology (M.I.T.). They did the largest, most detailed study to date of the protein structure that surrounds the human genome. Their findings reveal surprising and previously unknown specifics of how genes get switc...

Estrogen-like Component of Plastic Stimulates Growth of Certain Prostate Cancer Cells

An estrogen-like chemicalcommonly used to synthesize plastic food containers has been shown toencourage the growth of a specific category of prostate cancer cell,potentially affecting the treatment efficacy for a subset of prostatecancers.According to a study published in the January 1 issue of CancerResearch, such prostate cancer cells proved to be vulnerable toexposure to the chemical BP...

How an AIDS-Related Cancer Unleashes Inflammation

Although new HIV treatments have drastically reduced the incidence of Kaposi's sarcoma in developed countries, it remains a health threat in many developing countries. Now, researchers have discovered one way that Kaposi's sarcoma ?a cancer-like viral disease traditionally associated with AIDS ?triggers severe inflammation. Don Ganem, a Howard Hughes Medical Institute (HHMI) investigator,...

50-year-old Mystery Solved: Protein Tags Regulate Key Ion Channel

Researchers at the University of Chicago have found that a recently discovered biological process known as sumoylation -- until now thought to be active only in the nucleus -- also occurs near the cell's surface where it regulates at least one and possibly many kinds of proteins, providing a novel target for the development of new drugs. The discovery, published in the 8 April 2005 issue o...

Multi-purpose protein regulates new protein synthesis and immune cell development

A signaling protein called IRE1, which helps stressed-out cells make new proteins, may be more versatile and important than scientists believed. A new study by researchers from the University of Michigan Medical School and the Howard Hughes Medical Institute reveals the surprising finding that this same signaling protein is required for the formation of immune cells called B lymphocytes....

Scientists identify molecule that regulates well-known tumor suppressor

Scientists have discovered that a molecule called DJ-1 is likely to be involved in the generation of human tumors through negative regulation of the well-known tumor suppressor, PTEN. The research, published in the March issue of Cancer Cell, has important implications for determining the prognosis of some human cancers, and may prove to be a suitable target for cancer therapy. The phospha...

Love's all in the brain: fMRI study shows strong, lateralized reward, not sex, drive

You just can't tell where you might find love these days. A team led by a neuroscientist, an anthropologist and a social psychologist found love-related neurophysiological systems inside a magnetic resonance imaging machine. They detected quantifiable love responses in the brains of 17 young men and women who each described themselves as being newly and madly in love. The multidisciplinary...

First North American Encapsulated Islet Transplant without Long-term Immune Suppression into a Patient with Type 1 Diabetes

Biologists at the University of Liverpool have discovered how the plagues of the Middle Ages have made around 10% of Europeans resistant to HIV. Scientists have known for some time that these individuals carry a genetic mutation (known as CCR5-delta32) that prevents the virus from entering the cells of the immune system but have been unable to account for the high levels of the gene in Scandinavi...

Biomarkers isolated from saliva successfully predict oral and breast cancer

Screening for breast cancer and the early detection of other tumors one day may be as simple as spitting into a collection tube or cup, according to recent studies by UCLA researchers. In one early study based on a risk model, presented here at the 96th Annual Meeting of the American Association for Cancer Research, the UCLA scientists reported that genetic "biomarkers" isolated in saliva...

Protein helps regulate the genes of embryonic stem cells

New research from University of North Carolina at Chapel Hill shows how a protein may be crucial to the regulation of genes in embryonic stem cells. The protein, called "eed," is needed for an essential chemical modification of many genes. Embryos cannot survive without the modification. The findings appear in the May 24 issue of the journal Current Biology. The research offers an importan...

How A Latent Virus Eludes Immune Defenses

For a virus to survive, it must elude the ever vigilant immune sentinels of its host. A latent virus can escape immune detection if it resides in nondividing cells and doesn’t produce any proteins. No viral proteins means no red flags for immune cells. If the virus targets one of the many cell types that rarely divide, it’s relatively safe while latent. But some viruses, like the gamma-herpesviru...

Second messenger NAADP shows fast, dose-related impact on satiety cycle

One traditional approach to pharmaceutical design uses so-called "first messengers" ?hormones, other natural facilitators or synthetic products ?to initiate various cellular cascades for the desired physiological effect. To date, despite concerted efforts at all levels of research, this approach has failed to develop a truly successful obesity drug to address this major global health problem....

Cancer related gene p53 not regulated as indicated by previous tissue culture research

The cellular cascade of molecular signals that instructs cells with fatally damaged DNA to self-destruct pivots on the p53 tumor suppressor gene. If p53 is inactivated, as it is in over half of all human cancers, checks and balances on cell growth fail to operate, and body cells start to accumulate mutations, which ultimately may lead to cancer. Not surprisingly, the regulation of this vital safe...

Late peak may have prevented severe flu season from becoming worse

The 2004-2005 flu season was at least as severe as the 2003-2004 season, but peaked later according to data from Solucient, a leading provider of healthcare information. This later peak may have prevented the most recent flu season from being even worse. A flu season's severity is reflected in hospital admissions for community-acquired pneumonia (CAP), one of the most common complications...

To translate touch, the brain can quickly rearrange its sense of the body

The brain is bombarded by information about the physical proportions of our bodies. The most familiar sensations, such as a puff of wind or the brush of our own shirt sleeve, serve to constantly remind the brain of the body's outer bounds, creating a sense of what is known as proprioception. In a new study, researchers report this week that the brain's ability to interpret external signals and up...

Researchers identify new genes that regulate aging

Researchers have identified 23 new longevity genes by screening the genome of Caenorhabditis elegans, a small worm that is used as a model organism in genetics studies. The findings are reported in the inaugural issue of PLoS Genetics. Each of the 23 genes somehow normally acts to reduce longevity, whereas inhibiting any one of them increases lifespan. For example, the worm's lifespan doub...

Scientists find microRNAs regulate plant development

The plant hormone indole-3-acetic acid (IAA), commonly referred to as auxin, plays a major role in regulating plant growth and development. Auxin influences development by affecting the expression of numerous genes that control the processes of cell division and cell expansion in specific plant tissues at specific stages during the plant life cycle - e.g. for leaves, roots, and floral organs to d...

Temperature regulates circadian clock in zebrafish

The biological clock controls the circadian rhythms of a wide range of physiological and behavioral processes, from fluctuating hormone levels to sleep-wake cycles and feeding patterns. While it's well known that circadian clock elements sense and respond to light cycles, much less is known about how daily temperature cycles affect the clock's timing mechanism in vertebrates. In the open-access...

Scientists find new way to manipulate DNA

Polymers, large molecules comprised of chains of repeating structures, are used in everything from the coatings on walls of ships and pipes to reduce flow drag to gene therapy. But long polymer chains are subject to breakage, called scission, and a new study by the University of Michigan shows that as it turns out, much of what scientists previously thought about why polymers break whe...

New tools used to control foodborne hepatitis A outbreaks related to green onions

Novel use of genetic testing methods helped public health officials control and limit the further spread of four outbreaks of foodborne hepatitis A virus in 2003 related to the consumption of green onions, according to a detailed analysis published in the October 15 issue of The Journal of Infectious Diseases, now available online. The authors of the study, Joseph J. Amon, PhD, MSPH, and c...

Scavenger cells could be key to treating HIV-related dementia

Understanding macrophages could lead to ways to prevent HIV-associated dementia Macrophages, long-living white blood cells often considered the scavengers of the immune system, actually may damage a part...

Eating, body weight regulated by specific neurons

In findings with implications for pandemic influenza, a new study reports for the first time that a less-virulent strain of avian influenza virus can spread from poultry to humans. The research appears in the October 1 issue of The Journal of Infectious Diseases, now available online. Crossing the species barrier is an important step in the development of a flu virus with pandemic potenti...

Continued reduction in the number of drug-related deaths in the UK

The National Programme on Substance Abuse Deaths (np-SAD) based at the International Centre for Drug Policy, St George's, University of London, has found that there has been a decline in the number of drug-related deaths occurring, from 1,487 in 2003 to 1,372 in 2004, a drop of eight per cent. The report published today contains information on drug-related deaths for the year 2004 reported by Co...

MicroRNA gene that regulates lifespan found by Yale scientists

Genes that control the timing of organ formation during development also control timing of aging and death, and provide evidence of a biological timing mechanism for aging, Yale researchers report in the journal Science. "Although there is a large variation in lifespan from species to species, there are genetic aspects to the processes of development and aging," said <a href="http://www.y...

Lethal needle blight epidemic may be related to climate change

Increased summer precipitation apparently helping to spread spores of pathogen Biologists studying a lethal blight of lodgepole pines in northwestern British Columbia present strong evidence in the September issue of BioScience that climate change is to blame for the outbreak. The blight, caused by the fungus Dothistroma septosporum, causes trees to lose their needles and, in the case of...

Plant gene related to cancer treatment may foster new oncology drugs

Two proteins involved in the process that controls plant growth may help explain why human cells reject chemotherapy drugs, according to an international team of scientists. Researchers from Purdue University and Kyoto University in Japan have shown for the first time that proteins similar to multi-drug resistant proteins in humans move a plant growth hormone into cells, said Purdue...

Multiple genes permit closely related fish species to mix and match their color vision

Vision, like other biological attributes, is shaped by evolution through environmental pressures and demands, and even closely-related species that are in other ways very similar might respond to their particular environments by interpreting the visual world slightly differently, using photoreceptors that are attuned to particular wavelengths of light. By studying a special group of closely-relat...

Brain activity related to processing faces is similar in people with, without autism

New brain imaging research at the University of North Carolina at Chapel Hill indicates that when people with autism look at a face, activity in the brain area that responds is similar to that of people without autism. The finding is surprising, as it is widely known that autistic individuals tend to avoid looking directly at faces. The research also counters previous published reports tha...

Noise And Delays Explain Why Some Genes Oscillate In Activity

If you snooze, you lose those uncomely grayish-brown crescents below your eyes. If you don't snooze, you lose a lot more. The body can't fight off infection, the muscles can't regenerate as quickly, the mind can't learn new words, and the eyes can't focus on the road. You also gain things: a bad mood and increased risk for diabetes, high blood pressure, and heart problems. Indeed, the effects of...

New battery technology helps stimulate nerves

With the help of new silicon-based compounds, scientists -- and patients -- are getting a significant new charge out of the tiny lithium batteries used in implantable devices to help treat nervous system and other disorders. The lithium battery is the workhorse in implantable devices -- stimulators used to jump start the heart and help the central nervous system make critical connections i...

Do the Europeans turn ill sitting up so late?

An extensive EU-financed sleep research project is coordinated from FinlandIn spring 2005 a large European research and training network was establishedto investigate the causes and implications of poor sleep from the medical as well as from the social point of view. This EU-financed sleep research project, named"The biomedical and sociological effects of sleep restriction" will last for four yea...

Lateral thinking produces first map of gene transmission

A University of Queensland study mapping the evolution of genes has shed light on the role of gene transfer in bacterial diseases. Dr Robert Beiko, Professor Mark Ragan and Mr Timothy Harlow examined the genomes of 144...

Langerhans cells regulate immune reactions in the skin

Researchers at Yale School of Medicine have demonstrated that Langerhans cells in the skin, which had been thought to alert the immune system to pathogens, instead dampen the skin's reaction to infection and inflammation. Dendritic...

The reason why antiviral therapy can't annihilate HIV infection, and what to do about it

Antiviral therapy has been used to suppress HIV replication and has dramatically improved the clinical course of disease in affected patients. But the existence of viral reservoirs precludes the complete elimination of HIV from treated patients. In a new study appearing on November 1 in The Journal of Clinical Investigation, Tae-Wook Chun and colleagues from the NIH offer new insight into the er...
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