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Tag: "publicly" at biology news

Research team identifies new Alzheimer's gene

... comprehensive set of high-quality data to be made publicly available to the research community. The researchers believe that deposition of this data set in the public domain will open a new era in Alzheimer research. When a scientist suspects a particular gene or pathway maybe implicated in Alzheimer’s disea...

New details on how the immune system recognizes influenza

...unity against different pathogens--all of which is publicly accessible on their Web site (see http://immuneepitope.org ). ...

LIAI completes world's most comprehensive analysis on influenza virus data

...oward new therapies and vaccines." The database, publicly accessible at http://immuneEPITOPE.org , includes information culled from more than 100,000 separate research articles published over several decades, with the influenza information representing only a portion of the massive data set. "The influenz...

Speeding 'fingertip' discovery -- 20 years of protein info in 1 place

...n events to lists compiled by others and created a publicly available database on the Web - PhosphoMotif Finder [ http://www.hprd.org/PhosphoMotif_finder ] - to help speed the work of researchers around the world. “Finding so many at one time is a huge advance,?says Akhilesh Pandey, M.D., Ph.D., an asso...

Pacific Rim researchers to collaborate on distributed bioinformatics analysis of avian flu

...er Framework (CSF4), while making any new software publicly available through open-source licenses. The funding to the University of Hawaii will allow it to become a node in the computational grid ?allowing it to access data for molecular-dynamics simulations using high-performance computing. "We need a be...

New science of metagenomics 'will transform modern microbiology'

...ittee urged that metagenomic data likewise be made publicly available in international archives as rapidly as possible. The databases should include not only gene sequences but also information about sampling and DNA extraction techniques, as well as the computational and algorithmic methods used to analyze ...

A silent pandemic: Industrial chemicals are impairing the brain development of children worldwide

...t Sinai School of Medicine systematically examined publicly available data on chemical toxicity in order to identify the industrial chemicals that are the most likely to damage the developing brain. The researchers found that 202 industrial chemicals have the capacity to damage the human brain, and they c...

Researchers barcode DNA of Venice museum's vast fungi collection

...s one of the largest in Europe. The project was publicly announced in Italy today (Wednesday, Dec. 13) at the prestigious Venetian Institute of Sciences, Letters and Arts. "We are building up a huge molecular database that will be available to the entire scientific community," said Matteo Garbelotto, UC...

Genomic comparison of lactic acid bacteria published

...e number of lactic acid bacterial genomes that are publicly available and provides the research community with a wealth of high-quality data that can be used to understand and improve starter cultures for dairy, meat, and wine fermentations; probiotic cultures; and other industrial applications. The extensive...

PNAS study reveals why organs fail following massive trauma

...en access endeavor as well. The results are posted publicly and hundreds of researchers have already accessed the PNAS study results and applied them to their own projects. The grant is organized into seven research cores, with the PNAS study written within the Protein Analyses and Cell Biology (PACB) Core...

History-hunting geneticists can still follow familiar trail

...als." UF Genetics Institute scientists analyzed publicly available mtDNA datasets of 47 species of mammals -- a subset of the animals that were in the French study -- as well as associated data on protein diversity in the same species. A greater variety of proteins indicates more diverse DNA, because DNA c...

MIT finds most complex protein knot ever seen

...on a computer program and a web server, soon to be publicly available, that can analyze the structure of any protein to see if it has knots, which he believes could be helpful to researchers in structural genomics. (Structural genomics aims to determine the structure of all proteins produced by a given organi...

Americans support free access to research

...ewed journal articles stemming from their research publicly available via the Internet. ATA supports this measure and provides information and materials related to the legislation at http://www.taxpayeraccess.org . ...

NYU algorithm enhances ability to detect cancer genes

...ifferent chip technologies, and finally, making it publicly available in order to facilitate its free and wide-spread usage. ...

Computational analysis shows that plant hormones often go it alone

...ab's microarray analysis of Arabidopsis genes to a publicly available database, where data is shared by colleagues investigating diverse biological questions. "The data was there but nobody had compared the effects of different growth hormones on gene expression side by side," says Nemhauser. The amount of...

When the going gets tough, slime molds start synthesizing

...of raw DNA sequencing data were being deposited in publicly available databases. Austin recalled, "One night I performed a bioinformatics search to look for genetic evidence that would suggest the existence of a type III PKS in Dictyostelium." Using various computer programs to find, assemble, and translate i...

Mitochondrial DNA sequencing tool updated

...aboratory tools, like computers, are often updated publicly as their analytical capabilities expand. In the September issue of the Journal of Molecular Diagnostics, NIH grantees report they have developed a second generation "lab on a silicon chip" called the MitoChip v2.0 that for the first time rapidly and...

UCR researchers design chip that can improve citrus varieties

...try-supported effort both added to and made use of publicly available citrus sequences to develop an entirely new tool that will benefit all citrus researchers and help sustain the citrus industry locally and worldwide," said Timothy Close , a professor of genetics at UCR and a co-leader of the project. "We...

Scientist warns of threat to last stronghold of endangered turtle

... they live to protect them." The tracking data is publicly available online and is creating much interest with more than 100,000 hits from over 150 countries on the site www.seaturtle.org/tracking each month. It's thought that globally more than 50,000 leatherback turtles are incidentally caught by fishe...

Study suggests that publicly available genome data may contain small but significant errors

... be unaware of potential errors lurking within the publicly available published, or "canonical" sequence. If ...as compared to the corresponding map computed from publicly available S. pombe sequence. The comparison showed a small number of significant discrepancies betwe...

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