An Epitope Tagging Vector for Gene Expression in Mammalian Cells
...Tagging Stratagenes pCMV-Tag1 vector is a general mammalian expression vector that contains the FLAG and c-myc epitopes positioned for either terminal or internal tagging of a target protein. The pCMV-Tag1 vector (figure 1) is derived from the pCMV-Script ...Safe Production of High-Titer Retrovirus
...s. Vector Description Fig.2 The general structure of the packaging vectors is diagrammed i...V-G-expressinglines have in the past been made, in general they are very poor due to thetoxicity of VSV-G to cells in which it is stably expressed. 1 Therefore...Functional Cloning Using ViraPort Retroviral cDNA Expression Libraries
...Cloning Strategy In the schematic showing a general strategy for functional cloning using ViraPort libraries ( Figure 1B ), high-titer viral stocks were transiently produced by transfecting a 293 cell-based retroviral producer line 8,9 with the plasmid cDNA library, t...Generate High-Quality, Directional Plasmid cDNA Libraries
... of plasmid clones. Stratagene has improved the general methods for constructing plasmid cDNA libraries and offers three plasmid-based cDNA library construction kits using the pBluescript II (prokaryotic), pCMV-Script (eukaryotic) and pAD-GAL4-2.1 (yeast two-hybrid) vectors (table ...Highly Active and Removable AffinityTagged Lambda Phosphatase
...ft inelectrophoretic mobility. In addition to this general application, Stratagene'snovel Lambda Phosphatase is readily removable; binding to calmodulin affinityresin completely eliminates lambda phosphatase activity. By using Stratagene'sLambda Phosphatase, investigators are able to assay the activity of ad...... to the Micromanipulator 5171 for general patch clamp measurements. This concludes the report from the MPI in Gttingen....A Unique Dimension in Biological Purity
... ATP ATP can be used as a general indicator for the presence of a microbiological bioburden, as it is a common substance in all kind of cells. Eppendorf Biopur products are ATP-free and therefore are optimally suited for use with ATP quantification kits. These kits ...Chemical Stability of Disposables
...refore only able to provide information of a general nature. In case of any doubt, you must conduct a test. Please also note our specifications on autoclavability (121C, 20 mins) of Eppendorf disposables. It is possible to attain the ultimate in safety by using the disposable tips and......increase fidelity. Rules for optimization of general reaction conditions to achieve maximum fidelity are provided below: - Start with 200 M of dNTP concentration. For smaller targets up to 2 kb try final concentrations of 80, 100, 120 and 150 ...Optimizing Büchi® Rotary Evaporator Applications
...icient cooling capacity for this application. As a general guideline, the following table can be referenced for selecting an appropriate Lauda Chiller. <TD align=middle widt......increase fidelity. Rules for optimization of general reaction conditions to achieve maximum fidelity are provided below: - Start with 200 M of dNTP concentration. For smaller targets up to 2 kb try final concentrations of 80, 100, 120 and 150 ...Optimizing Büchi® Rotary Evaporator Applications
...icient cooling capacity for this application. As a general guideline, the following table can be referenced for selecting an appropriate Lauda Chiller. <TD align=middle widt...Optimizing electroporation parameters
... order to obtain the same field strength. A general rule when determining the ideal field strength is that small cells require a higher field strength in order to achieve membrane permeation. The pulse voltages in Fig.1 and the corresponding Table 1 are the minimum values ...Efficient Recovery of Ultrapure Plasmid DNA
...f 96 plasmid samples. Handling The general process of plasmid recovery and purification is optimized by the new purification kits. An improved alkaline lysis step is used for plasmid isolation, which enables efficient separation of the plasmid DNA from chromosomal DNA.......optimization for primers CF and CR, we applied the general rule of starting with annealing temperatures around 5C below the calculated melting temperature (Tm ) and titrating for optimal MgCl2 concentrations. The Tm of both primers were recommended by the manufacturer (Operon, Inc., ...General Notes on Primer Design in PCR*
...rature is one of the Black Boxes of PCR. A general rule-of-thumb is to use an annealing tempe...s. In any event, careful observance of the general rules of primer design will help ensure successful experiments. Refere...The TripleMaster PCR System for three different amplifications
...erase and reaction buffers) are used for the general amplification of relatively short DNA fragments (100 bp to roughly 2,000 bp). However, demanding applications (such as long range PCR [1-2], high-fidelity PCR, or the amplification of complex templates) require additional rea...The QIAGEN Guide to Animal Cell Culture
...s in this series are examples of methods for general cell culture and have not been rigorously validated and optimized by QIAGEN. There are many alternative protocols in current use. Cell counting using a hemocytometer It is often necessary to count cells, for ex...The QIAGEN Guide to Animal Cell Culture
... culturing animal cells. This article describes general considerations for cell culture conditions. The series will continue in future issues of QIAGEN News with cell culture protocols, followed by hints for successful transfection. Media and serum The choic...The QIAGEN Guide to Animal Cell Culture
... These protocols are examples of methods for general cell culture, and have not been rigorously validated and optimized by QIAGEN. There are many alternative protocols in current use. IMPORTANT: Potentially biohazardous materials (e.g., cells, culture medium, etc.) shou...The QIAGEN Guide to Animal Cell Culture
...s in this series are examples of methods for general cell culture and have not been rigorously validated and optimized by QIAGEN. There are many alternative protocols in current use. 1. Freshney, R.I. (1993) Culture of Animal Cells: a Manual of Basic Technique. 3...QIAGEN Instrument Service insist on the best in service and support
... requirements from small-scale research and general liquid-handling applications, to fully integrated automation systems for functional genomics, gene expression analysis, proteomics, and drug discovery. QIAGEN Instrument Service offers: A wide range of Ser...... Review primer design. Refer to Appendix, for general guidelines on multiplex PCR primer des... Review primer design. Refer to Appendix, , for general guidelines on multiplex PCR primer design. 7. Some......rect storage of primer solutions. Some general guidelines are given in Table 7 ... specific PCR product. Table 10 provides a general guideline for choosing the number of cycles. Table 10. Genera...QIAGEN Instrument Service - insist on the best in service and support
... requirements from small-scale research and general liquid-handling applications, to fully integ...anning In-house operator training - general or tailored to your applications Access to special offers - including the latest appl......mo Finnigan, San Jose, CA, USA). The general MS conditions were as follows: Source: ESI Ion Polarity: Positive Spray Voltage: 4600 V Sheath / Auxiliary Gas: Nitrogen Sheath Gas Pressure: 75 arb units Auxiliary Gas Pressure: 25 arb units Ion Transfer Cap...Structural Analysis of Glycosylated Peptides in Complex Mixtures with Ion Trap MSn
...t of sample all of which severely limit its general utility. Goal In this report, we describe a novel, highthroughput technique that will allow researchers to determine: The amino acid sequence of glycopeptides The exact site of attach...... that the primer sequences have the following general characteristics: Are 1824 bases l...he appropriate DNA polymerase. Here are some general guidelines: To increase the fidelity of PCR, use Pwo DNA Polymerase o......of the colorimetric testfor the experiments, is in general not very practicable since the problems investigated with these test systemsusually involve examination of the effects of severalparameters in a single experiment. The positive or negativechanges in the proliferation index or incorporation ofBrdU may...Advancing the quality control methodology to assess isolated total RNA and generated fragmented cRNA
...ncountered,either user related or gel related.Some general problems occurringwere sample migration, moldspots in the pre-cast gels andstaining difficulties. The key issueassociated with the RNA qualitycontrol gel was that at times the 18S and/or 28S bands of the totalRNA were not clearly visible onthe gels m...ArrayScript RT: Maximize Yields of Full-length cDNA
... make it an excellent choice for general reverse transcriptase applications that are not length sensitive, such as real-time RT-PCR. ArrayScript is provided in two convenient sizes, 4,000 U and 10,000 U, and a 10X Rea......RT. These results strengthen the general finding that RNase H treatment is desirable for the most sensitive detection of RT-PCR products. Ambion's MessageSensor RT Kit includes an MMLV RT that maintains full RNase H activi...Designing a Successful qRT-PCR Experiment
... For a helpful general resource for qRT-PCR approaches and strategies, Ambion recommends the following references: Bustin SA (2000) J Mol Endocrinol 25 : 169-93 and Bustin SA (2002) J Mol Endocrinol ...Optimizing Chemical Transfection and Electroporation of siRNAs
... is often achieved at higher voltages. Also, as a general rule, small cells require higher field strengths than larger cells. But increasing the voltage can also promote cell damage and increase the temperature of the reaction, further reducing ...Delivering siRNAs to Difficult Cell Types
... least 70% reduction in target gene expression. In general more pulses resulted in better siRNA uptake but increased cell mortality, thus the two must be balanced. Figure 4 shows the effect that varying pulses can have when a GAPDH siRNA or a control scrambled siRNA was electroporated...MessageAmp II: Use Less RNA for Array Analysis
...ted from each source. These data show some general trends found to be reproducible. For example, while aRNA yield generally increases with increasing amounts of input RNA, adding more than 1 g of HeLa S3 RNA does not significantly increase aRNA yield. Also, kidney RNA, which g...Getting Started with MicroRNA Research
... selection pressure. Here, we provide a general overview for analyzing miRNAs and describe some of the specialized tools that can help assess miRNA expression, function, and targets. MicroRNAs (miRNAs) are highly conse...Measuring RNase Activity A Real-time Kinetic Analysis
... Crystalline Deoxyribonuclease I. Isolation and general properties, spectrophotometric method for the measurement of desoxyribonuclease activity. J. Gen. Physiol . 33: 349-362. 2. Crook, E, Mathias, A Rabin, B (1960) Spectrophotomet...RNAi as a Tool for Mammalian Gene Analysis: Applications of siRNAs
...rference (RNAi) can be used as a general tool for mammalian gene function studies occurred with the seminal Elbashir et al. (1) publication describing the use of small interfering RNAs (siRNAs) in mammalian cells in 2001. In less than tw...Selecting siRNA Sequences to Incorporate into the pSilencer Vectors
...siRNAs provide a 75-95% reduction. The general process begins with scanning the length of the target gene for potential siRNA target sites. For siRNA expression vectors, the target sites should have 5' terminal AAs because, upon folding the siRNAs hairpins will...Setting up Successful siRNA Library Screens
...3 activation. Below we provide a general overview of an effective screening process. See <A href="http://www.ambion.com/techlib/tn/116/12.html">Recommendations for Successful siRNA Library Screens , for tips for ...RNA Interference and Gene Silencing: History and Overview
... it is rapidly degraded. This is a more general term than RNAi, since it can be triggered by several different means. Quelling - PTGS in Neurospora crassa induced by the introduction of a transgene. RISC - RNA-induced ...SeeSNP Propietary Analysis Advantages
...rity of PolyPhred analysis errors into four general categories: A) G after A TaqFS incorporation bias. B) Low quality sequence at the ends of amplicons. C) Over-estimation of base accuracy after enzyme slippage due to homopolymer stretches. D) Insertions and dele...Acrylamide Polymerization A Practical Approach
...ric oxygen will begin to appear. As a general rule, use the lowest catalyst concentrations that will allow polymerization in the optimal period of time. In the case of ammonium persulfate/TEMED-catalyzed reactions, for example, approximately equimolar concentrations of both ......N The design of DGGE primers follows the general principles of PCR primer design with respe...limits of the DGGE assay. To illustrate the general appearance of melt profiles, Figure 1a shows the profile of amplicons with a high dive...Inoculation of Viral RNA and cDNA to Potato and Tobacco Plants Using the Helios Gene Gun
...Pl. Viruses , 54 (1971) Brunt, A. A., The general properties of potyviruses, Arch. Virol., 5 , 3-16 (1992) Gal-On, A., et al., Particle bombardment drastically increases the infectivity of cloned DNA of zucchini yellow mosaic potyvirus, J. Gen. Virol., 76 , 32233227 ...Selection of Standards for Bio-Plex Cytokine Assays, Rev A
...r range of concentrations. A general indication of assay sensitivity is given by the lowest concentration in a set of standards that yields accurate recovery (70130%). Since the lowest concentration of the high-sensitivity standards is lower than the broad range ...Real-Time PCR: General Considerations, Rev A
...time PCR fall into 3 categories. These are general laboratory practices, template and primer design, and reaction components and conditions. When determining which conditions to optimize, the ultimate assay goal (i.e., qualitative analysis vs. quantitation) must be considered.......to cracking have made it an appealing membrane for general laboratory techniques. The two main applications for PVDF are N-terminal sequencing and immunoblotting, both of which benefit from the qualities of PVDF but rely on different features of the membrane. While sequencing w...The Bio-Rad Silver Stain, Rev E
... Silver staining was first introduced as a general protein stain useful in polyacrylamide gel...in-2 by Saccharomyces cerevisiae: use of a general secretion vector containing promoter and leader sequences of the mating pheromone α-fac...Sample Preparation Solutions for Cellular Protein Fractionation Poster, Rev A
...) employed should be simple, reproducible, general to a wide variety of cell types, and result in a low conductivity protein sample that is free of substances that interfere with 2DE. With these aims in mind, we will present several solutions for convenient and efficient extra...Transformation of Filamentous Fungi by High-Voltage Electroporation
...eparation. Therefore, it may prove to be a general method useful for introducing DNA into many fungal species in addition to T. harzianum, A. nidulans (Richey et al., 1989), F. solani (Richey et al., 1989), S. cerevisiae (Delorme, 1989; Hashimoto et al., 1985; Hill, 1989; Karu...Detection of Mutations in the CYP21 Gene Using the DCode System
... 14. Landt, O., Grunert, H. P., and Hahn, U., A general method for rapid sitedirected mutagenesis using the polymerase chain reaction, Gene, 96 (1):1258 (1990). back to top...Use of the DCode System to Detect the Food-Borne Bacterial Pathogen Listeria monocytogenes
... L. monocytogenes amplified by PCR using a general primer set and the Gene CyclerTM. The approach per...mains to be confirmed, however. The general bacterial primers used in this study amplify target sequences within the 16S rRNA gene of ma...Exploiting the Life Science Data Explosion to Speed New Drug Discovery
...lly useful in specialized applications, but in the general case the source data ill-fits these models, and these techniques become the logical equivalent to forcing a square peg into the round hole. <P >Further cluttering the landscape, researchers currently depend on proprietary “legacy”......0;LI > Sacrifice mice by exsanguination (under general anesthesia with isoflurane) by intra-vascular perfusion with phosphate buffered saline (PBS). The thorax is opened and a 21-gauge cannula inserted to the left ventricle. </LI><LI >Incise the right atrium to allow efflux of blood. Perf...Microgenomic Expression Profiling
...ents. The methods described herein are intended as general guidelines for microarray probe synthesis from limited amounts of RNA (≤2000 cells). Following laser microdissection of the desired cell population, RNA is isolated and then linearly amplified to generate antisense RNA (aRNA). When the starting...... extract samples. This technology can be used as a general tool to characterize other natural products. The extraction method was simple and effective. Following a rational study design, the powerful LC/MS/MS method allows a direct injection of a crude herbal extract to characterize active ingredien...SNPs Powerful Tools for Association Studies
... or greater indicates significant LD. P value is a general probability measure used to calculate whether the observed outcome was likely to occur by chance. Typically, in genetic studies, p value is used to measure the likelihood that two loci are not in LD. Therefore, a p value of 1 indicates a significant ...Polymer Degradation Mechanisms Encountered in Pyrolysis-GC/MS
...ion Report shows an example of each of these three general degradation processes. The analytical system consi... during pyrolysis may be described as one of three general cases. Either the polymer breaks apart into smaller versions of the macromolecule, producing oligome...