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Protein nanobiochip .. 104
Protein nanoarrays 105
Self-assembling protein nanoarrays. 105
Companies involved in protein biochip/microarray technology 106
4. Bioinformatics in Relation to Proteomics .. 110
Introduction .. 110
Bioinformatic tools for proteomics .. 110
Testing of SELDI-TOF MS Proteomic Data .. 110
BioImagine's ProteinMine 111
Bioinformatics for pharmaceutical applications of proteomics .. 111
In silico search of drug targets by Biopendium . 111
Compugen's LEADS .. 112
DrugScore 112
Proteochemometric modeling 112
Integration of genomic and proteomic data 113
Proteomic databases: creation and analysis .. 114
Introduction 114
Proteomic databases 114
GenProtEC 115
Human Protein Atlas .. 115 - 6 -
Human Proteomics Initiative 116
International Protein Index.. 116
Proteome maps .. 117
Protein Structure Initiative ? Structural Genomics Knowledgebase . 117
Protein Warehouse Database .. 117
Protein Data Bank .. 117
Universal Protein Resource .. 118
Protein interaction databases 118
Biomolecular Interaction Network Database .. 119
ENCODE .. 119
Functional Genomics Consortium .. 120
Human Proteinpedia .. 120
ProteinCenter .. 120
Databases of the National Center for Biotechnology Information . 121
Bioinformatics for protein identification .. 121
Application of bioinformatics in functional proteomics . 121
Use of bioinformatics in protein sequencing .. 121
Bottom-up protein sequencing .. 122
Top-down protein sequencing 123
Protein structural database approach to drug design 123
Bioinformatics for high-throughput proteomics 123
Companies with bioinformatic tools for proteomics 124
5. Research in Proteomi
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