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In this update, additional PCR performance comparisons are presented. PfuTurbo DNA polymerase and Taq DNA polymerase are compared with respect to PCR product yield and amplification of complex targets.
Figure 1 shows results from amplifying a series of primer-template systems using PfuTurbo DNA polymerase or Taq DNA polymerase. The a1-antitrypsin gene was amplified from human genomic DNA, using a series of 3 staggered primers to determine the maximum target length that can be amplified by each enzyme (lanes 1-4, PfuTurbo DNA polymerase; lanes 7-10, Taq DNA polymerase). Both enzymes successfully amplified the 0.9- and 2.0-kb targets in high yield. PfuTurbo DNA polymerase amplified the longer 3.9- and 5.2-kb targets in significantly higher yield than Taq DNA polymerase, and little smearing was observed. In contrast, significant smearing was evident in amplifications of 3.9-kb targets with Taq DNA polymerase.
Superior performance of PfuTurbo DNA polymerase was also observed when additional primer-template systems were tested. For example, PfuTurbo DNA polymerase successfully amplified an 8-kb target from rodent genomic DNA (lane 5) and a 14-kb target from lambda phage DNA (lane 6). In contrast, Taq DNA polymerase had difficulty amplifying these relatively long amplicons (lanes 11 and 12).
The error rates of a number of DNA polymerases have been measured previously
in a PCR-based forward mutation assay, which utilizes the lacIOlacZa
target gene.3 In these studies, Pfu DNA polymerase
exhibited an average error rate that was two-fold lower than that of Vent
and Deep Vent DNA polymerases,3 three- to six-fold
lower than those of DNA polymerase mixtures,3
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