ase contamination
can effectively be avoided by using RNase-free solutions such as Eppendorf
Molecular biology reagents and following a few common sense laboratory procedures:
- Always wear gloves when working with RNA.
- Maintain a separate area for RNA work that has an own set of pipettes,
pipette tips, Eppendorf tubes, buffers, and reagents. This is especially
important if your work requires the use of RNases for e.g. plasmid preparations.
- Sterile disposable plasticware produced under clean room conditions
is RNase-free and should be used when possible. Eppendorf Biopur tips
and tubes provide this quality feature in addition to being DNase free.
- Metal tools like spatulas can quickly be decontaminated by holding
in a burner flame for several seconds. Contaminating RNases on glassware
can be inactivated by baking the glassware at 180C or higher for
several hours.
Alternatively, glassware can be soaked in freshly prepared 0.1% DEPC in
water or ethanol for 1 hour, drained, and autoclaved (necessary to destroy
any unreacted DEPC which can otherwise react with other proteins and the
adenine residues of RNA). As DEPC will attack polycarbonate (e.g. centrifuge
tubes) or polystyrene (e.g. standard microtiter plates) decontamination
of these materials can be achieved by soaking in 3% hydrogen peroxide for
10 minutes. Residuals of pero xide can be removed by extensively rinsing
with RNase-free water1., 2.. An alternative protocol uses a 1 N NaOH soak
of 1 hour at 37C. After soaking in NaOH the labware is then washed
extensively in RNase-free water.
RNase decontamination of buffers and solutions
DEPC treatment of solutions is accomplishe
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New Insights Into DNA Decontamination2.
Measurement of proteasome inhibition in live cells in Molecular Devices microplate fluorometers