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Better RNA Amplification

. RNA samples were amplified and labeled using both procedures and hybridized to GeneChip Human Genome Focus Arrays following the Affymetrix guidelines. Microarray expression profiling data comparing MessageAmp II to the Affymetrix recommended protocol for GeneChip analysis indicates a high level of concordance between the two procedures (Figure 2).

Figure 2. Replicate Analysis of Two Amplification Protocols. Normalized array results are plotted from replicate amplifications. Both MessageAmp II (top) and Affymetrix standard protocol (bottom) were used to amplify identical total RNA samples (1 g), and equivalent amounts of the resulting aRNA were hybridized on matched lot Human Genome Focus arrays. IVT reactions were performed for 4 hr. Correlation values are included and indicate a measure of reproducibility with both methods.


Complete Kits for Amplifying RNA and Amino Allyl Labeling

The MessageAmp II and Amino Allyl MessageAmp II aRNA Amplification Kits contain all the necessary reagents for first-strand cDNA synthesis, RNase H digestion, second-strand cDNA synthesis, cDNA purification, in vitro transcription, and aRNA purification. The Amino Allyl MessageAmp II Kit also contains reagents for amino allyl labeling, dye coupling, and labeled aRNA clean-up. Reagents for 20 amplification reactions and a detailed Instruction Manual are included with both kits.

MessageAmp II is covered by patents exclusively licensed to Incyte Genomics.


* Incorporating Amino Allyl UTP during Amplification
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