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Genome Wide Profiling of Paired Cancerous and Normal Breast Tissues and Rapid Interpretation of Gene Expression Data

verage ratios between test and normal samples using variable fold change cutoffs and associated p-values.

In general, each array is normalized by the median chemiluminescent signal (i.e. assay normalization signal from output); the data set is filtered using a threshold of S/N > 3; and fold change is determined by the ratio of test sample(s) vs. normal sample(s) and p-values that associate with each fold change based on ANOVA test.


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