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RIKEN Center for Genomics Medicine Chooses Genedata Expressionist for High Throughput Proteomics R&D
Date:2/16/2010

Japan’s Largest Research Organization Uses Expressionist’s Data Processing and Analysis Capabilities to Eliminate Mass Spectrometry Data Analysis Bottlenecks

Basel, Switzerland and Tokyo, Japan (PRWEB) -- Genedata, a leading provider of advanced software solutions for drug discovery and life science research, today announced that the Japanese research foundation RIKEN has chosen Genedata Expressionist to support biomarker development for cancer research. The renowned government foundation is using proteome analysis and Mass Spectrometry (MS) to identify biomarkers to aid in the development of serum-based diagnostic methods.

“We generate huge volumes of MS data in our proteomics facility,” explained Dr. Koji Ueda, a project leader at the Laboratory for Biomarker Development at RIKEN. “Data analysis has been a major bottleneck and Genedata Expressionist is the only solution we found that can meet our high throughput needs.”

RIKEN’s biomarker development group is using the Refiner MS and Analyst modules from the Genedata Expressionist system for high throughput LC-MS-based proteomics data processing and analysis. Refiner MS processes thousands of samples and terabytes of raw MS data and combines intuitive visualization with sophisticated algorithms for peak intensity and alignment correction, detection, quantification and matching.

“In the field of Clinical Proteomics there has been a great need to quantitatively analyze as many clinical samples as possible because of individual variations
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