Navigation Links
Malaysia Genome Institute Advances Bioinformatics Research Using SGI Technology

SGI Altix, Altix XE Cluster and SGI InfiniteStorage Combination Delivers

Cohesive NAS/SAN Workflow Environment for All Stages of Research

SUNNYVALE, Calif. and LORNE, Australia, Feb. 20 /PRNewswire-FirstCall/ -- 29th Annual Lorne Genome Conference -- To create an optimal workflow that encompasses the diverse computing requirements of bioinformatics research, the Malaysia Genomics Institute (MGI) selected SGI (Nasdaq: SGIC) to design a unique SGI hybrid computing solution. Because bioinformatics research uses a variety of software at various stages in the workflow, the combined use of shared-memory systems and clusters can provide an optimal environment for the efficient use of each application. MGI looked to SGI to design a seamless, cohesive workflow for the entire process that would integrate into the existing infrastructure. SGI delivered a hybrid computing solution that consists of the new SGI BioCluster as well as an SGI(R) Altix(R) shared memory server and an SGI(R) InfiniteStorage CXFS(TM) SAN shared file system, which makes the entire workflow transparent to the user regardless of software employed or stage of the process at which scientists are performing.

"Bioinformatics brings together an avalanche of systematic biological data with the analytic theory and practical tools of mathematics and computer science," said Mohd Noor Mat Isa, Laboratory Manager, Malaysia Genome Institute. "SGI delivered flexible computing with a hybrid architecture that integrates high-throughput, high-performance and FPGA-based solutions for all of our bioinformatics applications -- a solution that seamlessly runs applications in the environment best suited for optimal performance."

Genomic sequencing operations utilize applications such as PHRAP, Staden Package, JAZZ , Consed, and BLAST each with specific compute requirements necessitating multiple systems. The SGI BioCluster solution includes a software layer providing transparent workload scheduling through which users can submit jobs without hardware concerns. The SGI solution's administrative software intelligently cues submissions to run on the appropriate platform, providing best-in-class performance and optimal load balancing. Integrated cluster management tools and dynamic software controls can change the total system from a single meta-cluster to semi-autonomous sub-clusters as needs dictate. For unexpected time-critical computing challenges, the SGI hybrid solution enables administrators to bring all available resources to bear on a single job.

MGI, also known as GENOMalaysia, is a network-based organization carrying out discovery research on tropical bioresources through projects in genome sequencing, comparative and functional genomics, and structural biology. Several major research projects are currently underway at MGI. For example, the Microbial Genomics Research for Gene and Natural Product Discovery project is focusing on two model organisms, Burkholderia pseudomallei, a locally important soil pathogen and Eimeria tenella, a local avian protozoan. The project will harness the SGI solution to dissect the organisms' genomes to gain new insights on virulence, antibiotic resistance, host specificity and infectivity.

The Institute also collaborates with other research facilities and universities throughout the world, including the Antarctica Research Group at the University of Tasmania, Wellcome Trust Sanger Institute, University of Sheffield, UK and Stanford University.

SGI worked with channel partner Quantum Beez Sdn Bhd (formerly known as Open Source Systems) to design and develop the SGI hybrid solution for MGI.

"Malaysia Genome Institute needed a single, integrated computing platform that leverages the best of two distinct computing environments: a larger shared memory system for high performance computing, and a cluster-based system for high throughput computing, both supported by an SGI InfiniteStorage CXFS SAN shared file system that provides uncompromised data sharing, improved workflow, and reduced costs for these data intensive environments," said Deepak Thakkar, higher education and research segment manager, SGI. "SGI produced one powerful solution with two architectures and a high-speed SAN infrastructure for direct access to all data. This hybrid solution delivers optimum return on investment for heterogeneous or multi-vendor based workflows."

SGI -- Innovation for Results(TM)

SGI (Nasdaq: SGIC) is a leader in high-performance computing. SGI delivers a complete range of high-performance server, visualization and storage solutions along with industry-leading professional services and support that enable its customers to overcome the challenges of complex data-intensive workflows and accelerate breakthrough discoveries, innovation and information transformation. SGI helps customers solve significant challenges whether it's enhancing the quality of life through drug research, designing and manufacturing safer and more efficient cars and airplanes, studying global climate change, providing technologies for homeland security and defense, or helping enterprises manage large data. With offices worldwide, the company is headquartered in Sunnyvale, Calif., and can be found on the Web at

(C) 2007 SGI. All rights reserved. SGI, Altix, the SGI cube and the SGI logo are registered trademarks, and CXFS is a trademark of SGI in the United States and/or other countries worldwide. All other trademarks mentioned herein are the property of their respective owners.

This news release contains forward-looking statements regarding SGI technologies and third-party technologies that are subject to risks and uncertainties. These risks and uncertainties could cause actual results to differ materially from those described in such statements. The reader is cautioned not to rely unduly on these forward-looking statements, which are not a guarantee of future or current performance. Such risks and uncertainties include long-term program commitments, the performance of third parties, the sustained performance of current and future products, financing risks, the ability to integrate and support a complex technology solution involving multiple providers and users, and other risks detailed from time to time in the company's most recent SEC reports, including its reports on Form 10-K and Form 10-Q.


Marla Robinson






Copyright©2008 PR Newswire.
All rights reserved

Related biology technology :

1. Imaging Diagnostic Systems New Laser Breast Imaging Scanner Introduced in Malaysia
2. BioElectronics Corporation Announces Singapore and Malaysia Sales
3. Biopure Gives Update on Malaysia Joint Venture Discussions
4. GeneNews CSO Dr. CC Liew awarded state honour by the Government of Malaysia
5. Human Genome Sciences to Sponsor Conference Call to Discuss Full Year 2007 Financial Results
6. Human Genome Sciences and Xencor Announce Antibody Collaboration
7. Human Genome Sciences Invites Investors to Listen to Webcast of Presentation at Merrill Lynch Conference
8. Venter Institute Scientists Create First Synthetic Bacterial Genome
9. Human Genome Sciences Invites Investors to Listen to Webcast of Presentation at JPMorgan Conference
10. Human Genome Sciences and Aegera Therapeutics Announce Licensing and Collaboration Agreement on Novel Anti-Cancer Drugs
11. Human Genome Sciences Initiates Second Randomized Phase 2 Trial of HGS-ETR1 in Combination With Chemotherapy
Post Your Comments:
(Date:11/24/2015)... SHPG ) announced today that Jeff Poulton , Chief ... Annual Healthcare Conference in New York City , ... p.m. GMT). --> SHPG ) announced today that ... Jaffray 27 th Annual Healthcare Conference in New ... 8:30 a.m. EST (1:30 p.m. GMT). --> Shire plc ...
(Date:11/24/2015)... 2015  Twist Bioscience, a company focused on ... Twist Bioscience chief executive officer, will present at ... 1, 2015 at 3:10 p.m. Eastern Time at The Lotte ... --> --> About ... is on Twitter. Sign up to follow our ...
(Date:11/24/2015)... , Nov. 24, 2015 /CNW Telbec/ - ProMetic Life ... announced today that Mr. Pierre Laurin , President and ... presentation at the upcoming Piper Jaffray 27 th Annual ... Hotel, on December 1-2, 2015. st , ... for one-on-one meetings throughout the day. The presentation will be ...
(Date:11/24/2015)... YORK , November 24, 2015 ... in a European healthcare ... which the companies will work closely together in identifying European ... unmet medical need. The collaboration is underpinned by a significant ... fund. This is the first investment by Bristol-Myers Squibb in ...
Breaking Biology Technology:
(Date:11/11/2015)...   MedNet Solutions , an innovative SaaS-based eClinical technology ... pleased to announce that it will be a Sponsor of ... to be held November 17-19 in Hamburg ... of iMedNet , MedNet,s easy-to-use, proven and ... has been able to deliver time and cost savings of ...
(Date:11/4/2015)... New York , November 4, 2015 ... to a new market report published by Transparency Market ... Share, Growth, Trends and Forecast 2015 - 2022", the global ... of US$ 30.3 bn by 2022. The market is ... the forecast period from 2015 to 2022. Rising security ...
(Date:10/29/2015)... ARBOR, Mich. , Oct. 29, 2015 /PRNewswire/ ... Eurofins Genomics for U.S. distribution of its DNA ... DNA-seq kit and Rubicon,s new ThruPLEX Plasma-seq kit. ... to enable the preparation of NGS libraries for ... plasma for diagnostic and prognostic applications in cancer ...
Breaking Biology News(10 mins):