Navigation Links
Genomatix, AAAS ink agreement

Genomatix integrates connections map data into BiblioSphere

Genomatix Software GmbH and the American Association for the Advancement of Science (AAAS) today announced an agreement that allows integration of data from the Signal Transduction Knowledge Environment into Genomatix's BibliospherePE pathway knowledge base and analysis system.

AAAS, publisher of the journal Science, developed the Signal Transduction Knowledge Environment, an enhanced online journal, known as Science's STKE, that also functions as an electronic resource enabling scientists, researchers, students and educators to find, organize, and use information relevant to cell regulation processes. Leading authorities enter their knowledge about cell signaling into the Connections Maps database, which includes data on signaling components and their relationships organized into pathways.

Genomatix developed the BibliospherePE pathway knowledge base and analysis system. It allows for dynamic data-driven network/pathway construction and analysis based on literature, the Genomatix Knowledge Base, and sequence analysis. It is an important component of the microarray data analysis pipeline offered by Genomatix and enables biologists to discover, explore and understand biologically relevant pathways down to the molecular level. Applying the Genomatix pipeline to a researcher's set of genes (for example, from a microarray analysis) generates the full biological network, allowing for functional analysis of the most relevant sub-network and enables understanding of gene regulatory mechanisms on DNA sequence level.

"The STKE database is a great synergistic expansion to our BiblioSPherePE knowledge base. Following our strategy to only include highest quality data backed by well known scientific authorities, I couldn't think of any better source than STKE published by AAAS along with the leading scientific weekly, Science," says Klaus May, head of sales and marketing at Genomatix.

"The combination of signal transduction pathways, metabolic pathways, transcription factor knowledge, promoter sequence analysis, different Gene Ontology and MESH filters -- all in one dynamically overlayable package -- makes BiblioSpherePE even more powerful and essential for molecular biology research."


'"/>

Source:Genomatix Software GmbH


Related biology news :

1. Wisconsin scientists grow critical nerve cells
2. Spleen may be source of versatile stem cells
3. Researchers discover way to make cells in the eye sensitive to light
4. Priming embryonic stem cells to fulfill their promise
5. Lack of enzyme turns fat cells into fat burners
6. Poor prenatal nutrition permanently damages function of insulin-producing cells in the pancreas
7. Elusive HIV shape change revealed; Key clue to how virus infects cells
8. Mouse brain cells rapidly recover after Alzheimers plaques are cleared
9. Enzyme allows B cells to resist death, leading to leukemia
10. Scientists rid stem cell culture of key animal cells
11. Genetically modified natural killer immune cells attack, kill leukemia cells
Post Your Comments:
*Name:
*Comment:
*Email:


(Date:1/20/2016)... 20, 2016  Synaptics Incorporated (NASDAQ: SYNA ... today announced sampling of S1423, its newest ClearPad ... small screen applications including smartwatches, fitness trackers, and ... and rectangular shapes, as well as thick and ... moisture on screen, while wearing gloves, and supports ...
(Date:1/15/2016)... JUAN, Puerto Rico , Jan. 15, 2016 /PRNewswire/ ... companies big and small to find new ways to ... driven culture. iOS and Android ... device based on biometrics, transforming it into a hardware ... request that users swipe their fingerprint on their KodeKey ...
(Date:1/13/2016)... 13, 2016 ... of the  "India Biometrics Authentication & ... (2015-2020)"  report to their offering.  ... announced the addition of the  "India ... Estimation & Forecast (2015-2020)"  report ...
Breaking Biology News(10 mins):
(Date:2/11/2016)... , February 11, 2016 ... ("PositiveID" or "Company") (OTCQB: PSID), a life sciences ... that its Thermomedics subsidiary, which markets the Caregiver® ... growth plan in January 2016, including entering into ... sequential monthly sales growth, and establishing several near-term ...
(Date:2/11/2016)... ... February 11, 2016 , ... ... announced a new agreement with Bankok,Thailand-based Global Stem Cells Network (GSCN) to distribute ... 15 Latin American countries, including Mexico, Costa Rica, Dominican Republic, Colombia, Argentina, Nicaragua, ...
(Date:2/10/2016)... February 10, 2016 Early-career researchers ... Peru , Uganda and ... in health and nutrition   Indonesia , ... and Yemen are being honored for ... They are also celebrated for mentoring young women scientists who are pursuing ...
(Date:2/10/2016)... , Feb.10, 2016 ASAE is introducing ... Association Management Companies (AMC) the option of joining or ... annual fee determined by staff size, every employee in ... join ASAE and reap all available member benefits.   ... "Our new organizational membership options will allow organizations of ...
Breaking Biology Technology: