Navigation Links
Ariadne Genomics Announces the Release of PathwayStudio?Central, Client-Server Software for Biological Pathway Analysis

Ariadne Genomics, Inc. today announced the release of PathwayStudio?Central, client-server software for visualization and analysis of biological pathways and gene regulation networks for bio-medical research labs, biotechnology and pharmaceutical companies. PathwayStudio?Central is available for a free 20 day trial at

PathwayStudio?Central builds pathways from microarray data, identifies biomarkers, and models drug responses. The software comes with ResNet?database of 500,000+ functional relationships and MedScan?tool for automatic extraction of information from scientific literature.

ResNet?database of functional relationships for human, rat and mouse contains 52,000 annotated mammalian proteins, 40,000 chemicals, and over 500 thousand total functional relationships, among which there are 42,000+ physical protein-protein interactions, 46,000+ facts of gene expression regulation, and about 160,000 links between 1779 human diseases and individual proteins.

ResNet was compiled with MedScan?unique Natural Language Processing (NLP)-based tool. MedScan?leverages hand-crafted dictionaries of protein and chemical names, and precise text parsing and pattern matching algorithms specifically developed for biological text analysis.

“PathwayStudio?Central helps scientists to keep current with literature using embedded MedScan information extraction tool that can “read?scientific text and extract functional relationships on the fly? said Ilya Mazo, President of Ariadne Genomics. “They can get an immediate view of all known relationships for a protein or a small molecule, build pathways from gene lists or results of PubMed searches, or predict networks from the gene expression data.?/p>

PathwayStudio?Central is a scalable solution that can be easily deployed in a lab or throughout an entire organization, enabling pathway data sharing and user rights management. Server-side network analysis algorithms and MedScan informat ion extraction tools allow for computation intensive tasks and provide convenient interfaces for the integration with internal frameworks and third-party products.

For more information, visit Ariadne Genomics website



Related biology news :

1. Advancements In Genomics Foster Deep Sea Discoveries
2. Genomics researchers discover protein deficit that causes drug toxicity
3. Genomics-based vaccine could prevent deadly cattle disease
4. Genomics throws species definition in question for microbes
5. FDA Announces Series of Changes to the Class of Marketed Non-Steroidal Anti-Inflammatory Drugs (NSAIDs)
6. Improved Outcomes Releases GeneLinker(TM) Gold and Platinum Version 4.6
7. NIH Calls on Scientists to Speed Public Release of Research Publications
8. Affymetrix and Stratagene Announce Strategic Software Alliance
9. Software Tool for Converting Scientific Text into a Database of Functional Relationships
10. Software agents could help unmask reality of disease clusters
11. Software might revolutionize glucose monitoring in critically ill patients
Post Your Comments:

(Date:10/29/2015)... , Oct. 29, 2015   MedNet Solutions ... the entire spectrum of clinical research, is pleased to ... High Tech Association (MHTA) as one of only three ... the "Software – Small and Growing" category. The Tekne Awards ... who have shown superior technology innovation and leadership. ...
(Date:10/29/2015)... 29, 2015  Rubicon Genomics, Inc., today announced ... of its DNA library preparation products, including the ... ThruPLEX Plasma-seq kit. ThruPLEX Plasma-seq has been optimized ... NGS libraries for liquid biopsies--the analysis of cell-free ... applications in cancer and other conditions. Eurofins Scientific ...
(Date:10/29/2015)... , Oct. 29, 2015 Today, ... a partnership with 2XU, a global leader in ... a smart hat with advanced bio-sensing technology. The ... athletes to monitor key biometrics to improve overall ... partnership, the two companies will bring together the most ...
Breaking Biology News(10 mins):
(Date:11/25/2015)... , November 26, 2015 ... Biobanking Market 2016 - 2020 report analyzes that ... integrity and quality in long-term samples, minimizing manual ... cost-effectiveness. Automation minimizes manual errors such as mislabeling ... efficiency. Further, it plays a vital role in ...
(Date:11/25/2015)... -- Neurocrine Biosciences, Inc. (Nasdaq: NBIX ) announced today ... Neurocrine Biosciences, will be presenting at the 27th Annual ... . .   Listeners ... prior to the presentation to download or install any ... available on the website approximately one hour after the ...
(Date:11/25/2015)... ... November 25, 2015 , ... Jessica Richman and ... early in their initial angel funding process. Now, they are paying it forward ... make early stage investments in the microbiome space. In this, they join ...
(Date:11/24/2015)... 24, 2015 /CNW/ - iCo Therapeutics ("iCo" or "the ... results for the quarter ended September 30, 2015. ... dollars and presented under International Financial Reporting Standards ... ," said Andrew Rae , President & ... are not only value enriching for this clinical ...
Breaking Biology Technology: