Navigation Links
University of Illinois researchers discover potential new virus in switchgrass
Date:11/3/2010

University of Illinois researchers have confirmed the first report of a potential new virus belonging to the genus Marafivirus in switchgrass, a biomass crop being evaluated for commercial cellulosic ethanol production.

The virus is associated with mosaic and yellow streak symptoms on switchgrass leaves. This virus has the potential of reducing photosynthesis and decreasing biomass yield. Members of this genus have been known to cause severe yield losses in other crops. For example, Maize rayado fino virus (MRFV), a type member of the genus, has been reported to cause yield reductions in corn grown in Mexico, Central America and South America.

"Viral diseases are potentially significant threats to bioenergy crops such as Miscanthus x giganteus, energycane and switchgrass," said Bright Agindotan, research associate working in Carl Bradley's laboratory as part of the Energy Biosciences Institute (EBI) located in the Institute for Genomic Biology at the U of I. "Our team at EBI has been charged with identifying potential pests and pathogens of these bioenergy crops."

Until recently, little has been known about viruses in these bioenergy crops. Agindotan said most plants can be infected with multiple viruses, making it a challenge to know which viruses to start screening for, especially when only a few viruses have been reported to affect these crops.

Agindotan developed a method that allows for the identification of a virus without prior knowledge of it. He successfully used sequence-independent amplification (SIA) to identify RNA viruses. This is the first time it has been fully described and used for plant virus identification.

The method involves virus partial purification for a small amount of infected leaf tissue, extraction of viral RNA, random amplification, cloning, sequencing, and searching databases to identify the virus.

"Sequence-independent amplification has a distinct advantage over other virus characterization techniques in that it does not require specific reagents to target viruses," he said. "This test will help us specifically identify uncharacterized viruses. In other words, you don't have to know which virus you are looking for, exactly, to able to be able to identify the virus causing the problem."

The identified virus in switchgrass is different, but related to the MRFV that has been reported to infect corn elsewhere, but has never been reported in Illinois.

The Marafivirus was identified in switchgrass from a U of I research field near campus, where 20 to 30 percent of the plot was infected with this virus.

"We are still working on identifying the insects that are responsible for transmitting it," he said. "We know that its MRFV relative is transmitted by leafhoppers in corn, but we are still trying to confirm the exact species that transmit this virus in switchgrass."

At this time, researchers cannot confirm if this virus affects other crops.

"We don't yet know if the Marafivirus in switchgrass evolved from the one that infects maize or vice versa," he said.

Developing biomass crops that do not harbor pathogens that can spread to nearby cultivated food crops such as cereals is a high priority for plant breeders. This discovery will help plant breeders develop resistant varieties, Agindotan said.

The group will report the full genome sequence of the switchgrass virus soon.


'/>"/>

Contact: Jennifer Shike
jshike@illinois.edu
217-244-0888
University of Illinois College of Agricultural, Consumer and Environmental Sciences
Source:Eurekalert  

Related biology news :

1. Texas A&M University becomes key player in global study to save Earths endangered species
2. Falling in love more scientific than you think, according to Syracuse University professor
3. Offshore wind a mixed bag: University of Maryland study
4. Syracuse University partners with Arden-Fox to advance DODs Net Zero Energy Initiative
5. Yale University researchers find key genetic trigger of depression
6. Team of chemists produces biodiesel at their university, using used cooking oil as a basis
7. Queens University Belfast lung injury study could save lives in critically ill
8. Unlike us, honeybees naturally make quick switch in their biological clocks, says Hebrew University researcher
9. University of Utah microbubbles clean dirty soil in China
10. Ben-Gurion University of the Negev hosts UNESCO conference on drylands, deserts and desertification
11. Brown University chemists simplify biodiesel conversion
Post Your Comments:
*Name:
*Comment:
*Email:
Related Image:
University of Illinois researchers discover potential new virus in switchgrass
(Date:4/6/2017)... 6, 2017 Forecasts by Product ... Readers, by End-Use (Transportation & Logistics, Government & Public ... & Fossil Generation Facility, Nuclear Power), Industrial, Retail, Business ... Are you looking for a definitive report on ... ...
(Date:4/4/2017)... , April 4, 2017   EyeLock LLC ... announced that the United States Patent and Trademark Office ... broadly covers the linking of an iris image with ... transaction) and represents the company,s 45 th issued ... patent is very timely given the multi-modal biometric capabilities ...
(Date:3/30/2017)... March 30, 2017 Trends, opportunities and forecast ... behavioral), by technology (fingerprint, AFIS, iris recognition, facial recognition, ... others), by end use industry (government and law enforcement, ... and banking, and others), and by region ( ... Asia Pacific , and the Rest ...
Breaking Biology News(10 mins):
(Date:10/12/2017)... ... October 12, 2017 , ... ... analysis platform specifically designed for life science researchers to analyze and interpret ... Rosalind Franklin, who made a major contribution to the discovery of the ...
(Date:10/11/2017)... , ... October 11, 2017 , ... ... announced today it will be hosting a Webinar titled, “Pathology is going digital. ... Associates , on digital pathology adoption best practices and how Proscia improves lab ...
(Date:10/11/2017)... ... October 11, 2017 , ... ... has granted orphan drug designation to SBT-100, its novel anti-STAT3 (Signal Transducer and ... of osteosarcoma. SBT-100 is able to cross the cell membrane and bind intracellular ...
(Date:10/10/2017)... 2017 International research firm Parks Associates announced today ... the TMA 2017 Annual Meeting , October 11 in ... home security market and how smart safety and security products impact the ... Parks Associates: Smart Home Devices: ... "The residential security market has experienced ...
Breaking Biology Technology: