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Rare earths in bacteria
Date:10/30/2013

corresponds to concentrated sulphuric acid.

The microbes produce their energy from methane. They have a special enzyme, methanol dehydrogenase, which processes the methanol produced in the decomposition of methane with the aid of metal co-factors. Most of these bacteria use calcium for this process.

In the course of their investigations, the Nijmegen researchers noticed that Methylacidiphilum thrives only with original water from the mudpot. None of the trace elements which the researchers added to the Petri dishes encouraged the bacteria to grow. An analysis of the water showed that it contained concentrations of rare earths that were one hundred to one thousand times higher than normal.

Thomas Barends and Andreas Dietl from the Max Planck Institute for Medical Research investigated the three-dimensional structure of methanol dehydrogenase. They thereby noticed that Methylacidiphilum fumariolicum had inserted not calcium, but an atom of a different metal in its methanol dehydrogenase.

"Suddenly, everything fit together," explains Thomas Barends. "We were able to show that this mysterious atom must be a rare earth. This is the first time ever that rare earths have been found to have such a biological function." Methylacidiphilum uses the rare earths lanthanum, cerium, praseodymium and neodymium in its methanol dehydrogenase instead of calcium. The bacterium needs them to produce energy from methane.

The rare earths have a slightly larger ion radius than calcium, but can still replace it as a co-factor of enzymes. "Individual amino acids have been exchanged in the amino acid chain of the methanol dehydrogenase of the bacterium. This creates more room for the metals," says Barends. In addition, Methylacidiphilum digests a larger quantity of rare earths than it needs to survive. It is therefore possible that it stores the metals in the cell.

Genome and proteome analyses suggest that the <
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Contact: Dr. Thomas Barends
thomas.barends@mpimf-heidelberg.mpg.de
49-622-148-6508
Max-Planck-Gesellschaft
Source:Eurekalert  

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