Navigation Links
Paddlefish's doubled genome may question theories on limb evolution
Date:8/7/2012

SAN FRANCISCO, August 7, 2012 -- The American paddlefish -- known for its bizarre, protruding snout and eggs harvested for caviar -- duplicated its entire genome about 42 million years ago, according to a new study published in the journal Genome Biology and Evolution. This finding may add a new twist to the way scientists study how fins evolved into limbs since the paddlefish is often used as a proxy for a more representative ancestor shared by humans and fishes.

"We found that paddlefish have had their own genome duplication," said Karen Crow, assistant professor of biology at San Francisco State University. "This creates extra genetic material that adds complexity to comparative studies. It may change the way we interpret studies on limb development."

In order to study how human limbs develop, scientists compare the limb-building genes found in mice with fin-building genes found in fishes. Previous research on paddlefish has suggested that fishes possessed the genetic toolkit required to grow limbs long before the evolution of the four-limbed creatures (tetrapods) that developed into reptiles, birds, amphibians and mammals.

In the last decade, paddlefish have become a useful benchmark in evolutionary studies because their position on the evolutionary tree makes them a reasonably good proxy for the ancestor of the bony fishes that evolved into tetrapods such as humans. However, the fact that paddlefish underwent a genome duplication could complicate what its genes tell us about the fin-to-limb transition, says Crow.

"Our findings suggest that the results of previous studies using paddlefish as a comparative species may need to be re-interpreted," Crow said.

Crow and colleagues sequenced chromosomal regions containing 19 Hox genes in the American paddlefish. Hox genes determine body shape and limb development, and have become prime candidates for detecting whole genome duplications.

Whole genome duplications are game-changing events in evolutionary history that give rise to new species or novel features within a species. They occur when a series of unlikely circumstances coincide, resulting in twin copies of every gene. When this happens, one scenario that could take place is that one gene in the pair keeps its designated function while the other is either lost or takes on a new purpose.

"This extra genetic material provides the canvas for evolution to paint with," said Crow, who studies the evolution of novelty and diversity.

Two milestone genome duplications are believed to have taken place before the evolution of jawed vertebrates. Additional whole genome duplications have also taken place further down the evolutionary tree, in specific lineages or branches, but it is a phenomenon more common in plants than animals.

"Our findings on the paddlefish suggest that whole duplication is not as uncommon in animals as previously thought," Crow said.


'/>"/>
Contact: Elaine Bible
ebible@sfsu.edu
415-405-3606
San Francisco State University
Source:Eurekalert  

Related biology news :

1. Leading evolutionary scientist to discuss how genome of bacteria has evolved
2. Darwin in the genome
3. Analysis of stickleback genome sequence catches evolution in action
4. Athletic frogs have faster-changing genomes
5. PNAS: Precise molecular surgery in the plant genome
6. BGI and Aspera collaborate on high-speed data exchange to advance genome research
7. Researchers announce GenomeSpace environment to connect genomic tools
8. UC Santa Cruz builds national data center for cancer genome research
9. BGI reports the completed sequence of foxtail millet genome
10. Relative reference: Foxtail millet offers clues for assembling the switchgrass genome
11. Maps of Miscanthus genome offer insight into grass evolution
Post Your Comments:
*Name:
*Comment:
*Email:
Related Image:
Paddlefish's doubled genome may question theories on limb evolution
(Date:4/14/2016)... , April 14, 2016 ... and Malware Detection, today announced the appointment of ... the new role. Goldwerger,s leadership appointment comes ... the heels of the deployment of its platform at ... behavioral biometric technology, which discerns unique cognitive and physiological ...
(Date:3/31/2016)... , March 31, 2016  Genomics firm Nabsys has ... CEO, Barrett Bready , M.D., who returned to ... the original technical leadership team, including Chief Technology Officer, ... Product Development, Steve Nurnberg and Vice President of Software ... the company. Dr. Bready served as CEO ...
(Date:3/22/2016)... , March 22, 2016 ... research report "Electronic Sensors Market for Consumer Industry by ... & Others), Application (Communication & IT, Entertainment, ... - Global Forecast to 2022", published by ... is expected to reach USD 26.76 Billion ...
Breaking Biology News(10 mins):
(Date:6/27/2016)... 2016  Liquid Biotech USA ... a Sponsored Research Agreement with The University of ... from cancer patients.  The funding will be used ... with clinical outcomes in cancer patients undergoing a ... be employed to support the design of a ...
(Date:6/24/2016)... Brooklyn, NY (PRWEB) , ... June 24, 2016 , ... ... 15mm, machines such as the Cary 5000 and the 6000i models are higher end ... height is the height of the spectrophotometer’s light beam from the bottom of the ...
(Date:6/23/2016)... 2016   Boston Biomedical , an industry ... to target cancer stemness pathways, announced that its ... Drug Designation from the U.S. Food and Drug ... including gastroesophageal junction (GEJ) cancer. Napabucasin is an ... cancer stemness pathways by targeting STAT3, and is ...
(Date:6/23/2016)... , ... June 23, 2016 , ... ... YM (Yeast and Mold) microbial test has received AOAC Research Institute approval 061601. ... microbial tests introduced last year,” stated Bob Salter, Vice President of Regulatory and ...
Breaking Biology Technology: