Navigation Links
New portal for plant genomics will support research into improved crops
Date:10/8/2009

Today sees the launch of Ensembl Plants a freely available web resource for plant genomics research by the European Molecular Biology Laboratory's European Bioinformatics Institute (EMBL-EBI), in partnership with the Cold Spring Harbor Laboratory, USA. Ensembl Plants allows researchers worldwide to access and visualise the results of genome-scale experiments in different plant species. By pinpointing the genetic basis of beneficial characteristics such as drought and pest resistance, Ensembl Plants will make it easier for scientists to improve the productivity and health of crops - an important step towards meeting growing global food requirements over the coming decade.

Paul Kersey, leader of the Ensembl Genomes team at EMBL-EBI, said: "Ensembl Plants makes the results of genome-scale experiments available to the whole scientific community. The interface is familiar to researchers as it is already in use for the visualisation of information about the genomes of other species, making this new resource very accessible."

The first release includes genome data from new research funded by the Biotechnology and Biological Sciences Research Council (BBSRC). Richard Mott from the University of Oxford's Wellcome Trust Centre for Human Genetics, along with Paula Kover from the University of Bath, have sequenced the genomes of 17 strains of the thale cress Arabidopsis thaliana. Arabidopsis was the first plant to have its genome sequenced, and is an important reference point for applied plant research. In addition to providing a detailed catalogue of variation in the Arabidopsis genome, the project serves as a pilot for the application of high-throughput sequencing methods to plant genomes.

Richard Mott said: "Now that we have 17 Arabidopsis genomes represented in the database we have an incredibly powerful tool for plant genetics research. This will allow us to identify useful genetic traits that are likely to be found throughout the plant kingdom." "Researchers across the world can then use that information to improve crops, contributing towards efforts to increase food production and adapt crops to changing climates" added Paula Kover.

Ensembl Plants has been co-developed by EMBL-EBI and the group of Doreen Ware who run the Gramene database at the Cold Spring Harbor Laboratory, USA. Gramene already utilises the Ensembl open source software system, originally developed by EMBL-EBI and the Wellcome Trust Sanger Institute, for studying the genetic differences between plant species. The Ensembl Plants and Gramene groups will collaborate to maintain a common set of reference databases, integrating experimental data generated on both sides of the Atlantic.

The launch of Ensembl Plants completes the set of new Ensembl-powered portals (for bacteria, protists, fungi, and invertebrate metazoa) launched by EMBL-EBI during 2009.


'/>"/>

Contact: Louisa Wright
louisa@ebi.ac.uk
44-122-349-4665
European Molecular Biology Laboratory
Source:Eurekalert

Related biology news :

1. Human Proteinpedia, a portal to share human protein data among the scientific community
2. MBL develops infrastructure and portal for Encyclopedia of Life
3. Ultra-low-dose aspirin might decrease bleeding severity in portal hypertension
4. Iowa State researchers looking for catalyst that allows plants to produce hydrocarbons
5. A step toward better brain implants using conducting polymer nanotubes
6. Erie County home to plant never before recorded in Pa.
7. MSU licenses plant oil enhancement technology to BASF Plant Science
8. Plants response to fire tested
9. Lotus-plant-inspired dust-busting shield to protect space gear
10. Explaining why pruning encourages plants to thrive
11. Rare genetic disease successfully reversed using stem cell transplantation
Post Your Comments:
*Name:
*Comment:
*Email:
(Date:6/20/2016)... June 20, 2016 Securus Technologies, a ... solutions for public safety, investigation, corrections and monitoring ... involved, it has secured the final acceptance by ... for Managed Access Systems (MAS) installed. Furthermore, Securus ... to be installed by October, 2016. MAS distinguishes ...
(Date:6/7/2016)... June 7, 2016  Syngrafii Inc. and San ... relationship that includes integrating Syngrafii,s patented LongPen™ eSignature ... This collaboration will result in greater convenience for ... union, while maintaining existing document workflow and compliance ... ...
(Date:6/1/2016)... , June 1, 2016 Favorable ... Election Administration and Criminal Identification to Boost Global Biometrics ... recently released TechSci Research report, " Global Biometrics Market ... Competition Forecast and Opportunities, 2011 - 2021", the global ... by 2021, on account of growing security concerns across ...
Breaking Biology News(10 mins):
(Date:6/23/2016)... Wausau, WI (PRWEB) , ... June 23, 2016 ... ... probiotic supplements, is pleased to announce the launch of their brand, UP4™ Probiotics, ... supplements for over 35 years, is proud to add Target to its list ...
(Date:6/23/2016)... Lawrence, MA (PRWEB) , ... June 23, 2016 ... ... the Peel Plate® YM (Yeast and Mold) microbial test has received AOAC Research ... test platform of microbial tests introduced last year,” stated Bob Salter, Vice President ...
(Date:6/23/2016)... ... ... STACS DNA Inc., the sample tracking software company, today announced that Dr. ... STACS DNA as a Field Application Specialist. , “I am thrilled that Dr. ... STACS DNA. “In further expanding our capacity as a scientific integrator, Hays brings a ...
(Date:6/23/2016)... , June 23, 2016 On Wednesday, ... at 4,833.32, down 0.22%; the Dow Jones Industrial Average edged ... closed at 2,085.45, down 0.17%. Stock-Callers.com has initiated coverage on ... ), Nektar Therapeutics (NASDAQ: NKTR ), Aralez Pharmaceuticals ... (NASDAQ: BIND ). Learn more about these stocks ...
Breaking Biology Technology: