Navigation Links
Life isn't 2-D, so why should our encyclopedias be?
Date:8/22/2008

Biologists and biochemists are now able to access 3D images of biomacromolecules underlying biological functions and disease. Rather than relying on text to provide the understanding of biomacromolecule structures, a collaborative website called Proteopedia now provides a new resource by linking written information and three-dimensional structural information. The wiki web resource, first described in BioMed Central's open access journal Genome Biology, displays protein structures and other biomacromolecules in interactive format. These interactive images are surrounded by descriptive text containing hyperlinks that change the appearance (such as view, representations, colors or labels) of the adjacent 3D structure to reflect the concept explained in the text. This makes the complex structural information readily accessible and comprehensible, even to people who are not structural biologists.

The resource was developed at the Weizmann Institute of Science in Israel by Jaime Prilusky, Eran Hodis, and Joel L. Sussman, together with colleagues at the Weizmann Institute and in the USA. According to Sussman, "Using Proteopedia, anyone can easily create descriptions of biomacromolecules linked to their 3D structure."

Aside from content added by Proteopedia's existing users, pages on each of the more than 50,000 entries in the Protein Data Bank have been automatically created with 'seed' information, creating pages that are already useful and primed for expansion by users. Members of the scientific community are invited to request a user account to edit existing pages and to create new ones.

Hodis says, "We are presenting Proteopedia to the scientific community to judge its usefulness and merit, and we truly hope that it will offer an effective and appealing way to convey the link between 3D structure and function."


'/>"/>

Contact: Charlotte Webber
charlotte.webber@biomedcentral.com
44-020-763-19980
BioMed Central
Source:Eurekalert

Page: 1

Related biology news :

1. BMI criteria for obesity surgery should be lowered, UT Southwestern researcher suggests
2. Fisheries should be regarded as a part of the maritime environment
3. Should children be permitted to get genetic testing for BRCA 1/2 mutations?
4. Backpack straps can decrease blood flow in the shoulder and arm
5. Should embryos with a hereditary disorder be transferred if no unaffected embryos are available?
6. Children born after donor insemination should be told as soon as possible about their conception
7. Obese men have less semen, more sperm abnormalities, and should lose weight before trying for a baby
Post Your Comments:
*Name:
*Comment:
*Email:
(Date:4/4/2017)... 2017   EyeLock LLC , a leader of ... States Patent and Trademark Office (USPTO) has issued U.S. ... of an iris image with a face image acquired ... company,s 45 th issued patent. ... given the multi-modal biometric capabilities that have recently come ...
(Date:3/30/2017)... , March 30, 2017 Trends, opportunities ... (physiological and behavioral), by technology (fingerprint, AFIS, iris recognition, ... recognition, and others), by end use industry (government and ... immigration, financial and banking, and others), and by region ... , Asia Pacific , and ...
(Date:3/24/2017)... Controller General of Immigration from Maldives Mr. Mohamed Anwar and ... international IAIR Award for the most innovative high security ePassport and eGates  ... ... Maldives Immigration Controller General, Mr. Mohamed Anwar ... right) have received the IAIR award for the "Most innovative high security ...
Breaking Biology News(10 mins):
(Date:10/11/2017)... ... October 11, 2017 , ... Proscia ... be hosting a Webinar titled, “Pathology is going digital. Is your lab ready?” ... pathology adoption best practices and how Proscia improves lab economics and realizes an ...
(Date:10/11/2017)... the Netherlands and LAGUNA HILLS, Calif. ... The Institute of Cancer Research, London ... use MMprofiler™ with SKY92, SkylineDx,s prognostic tool to risk-stratify patients ... trial known as MUK nine . The University of ... trial, which is partly funded by Myeloma UK, and ICR ...
(Date:10/11/2017)... ... 2017 , ... A new study published in Fertility and ... in vitro fertilization (IVF) transfer cycles. The multi-center matched cohort study ... comparing the results from the fresh and frozen transfer cohorts, the authors of ...
(Date:10/10/2017)... ... ... San Diego-based team building and cooking events company, Lajollacooks4u, has unveiled a ... new look is part of a transformation to increase awareness, appeal to new markets ... It will also expand its service offering from its signature gourmet cooking classes and ...
Breaking Biology Technology: