Navigation Links
ISU researchers help map first plant-parasitic nematode genome sequence
Date:9/4/2008

AMES, Iowa -- There are numerous plant-parasitic nematodes in the world, but only a handful are responsible for the largest part of an estimated $157 billion in agricultural damage globally every year. Nematodes are small worms that burrow into plant roots and feed off living cells.

Now, Iowa State University researchers have contributed to the release of the annotated genome of one of the most destructive nematodes: Meloidogyne incognita -- the southern root-knot nematode, as reported recently in the journal Nature Biotechnology.

Sequencing the genome is a critical step toward comprehensively understanding how the organism works and may pave the way for research on ways to fight the pest.

"This is considered to be one of, if not the most important plant-parasitic nematode species across the world," said Thomas Baum, professor and chair of plant pathology and head of Iowa State University's contribution to the genome sequence project.

Root-knot nematodes are so important because they can be found almost anywhere in the world on almost any plant, he said. Nematodes are the most abundant animals on earth.

"Many of the nematodes that are really bad pathogens are very specialized on which plant they attack," said Baum. "This nematode has a huge host range. For us nematologists, it is very interesting and challenging to study."

Because the pest is so widespread, many nematologists around the world were eager to help with the project. The lead investigator was Pierre Abad of the Insitut National de Recherche Agronomiquea, a French research group, with help from researchers in Belgium, Holland, Great Britain, Switzerland, and Iowa State University and North Carolina State University in the US.

"Because it is such a worldwide problem, people are eager to contribute," Baum said. "Also, because it is the first plant-parasitic nematode to have its sequence released, people are very excited about it."

Chemical treatments for killing nematodes, called nematicides, are dangerous to humans and other animals so they've been restricted in use for decades. Technology for controlling nematodes has advanced little in the past three decades.

Besides being a devastating crop pathogen, Meloidogyne incognita has some remarkable biological adaptations that make it a fascinating organism to study.

Baum said that the sex of the tiny worms, or better the lack thereof is very intriguing. Only females reproduce and they do so without having sex, so it remains a puzzle why males of the species even exist. And since the females don't mate to reproduce, the offspring should be genetically identical to the mother -- like a clone - but they aren't. And as the offspring matures into males or females, some start as females and then change into males.

Baum's group included postdoctoral researcher Tarek Hewezi and assistant scientist Tom Maier from Iowa State. The three worked on a specific part of the genome and performed manual annotations of genes. Professor Davis and postdoctoral research associate, Noureddine Hamamouch, used the current known parasitism genes to identify the full suite or predicted parasitism genes in the root-knot nematode genome.

With this sequencing done, Baum thinks researchers can now try to understand this nematode. He also cautions that finding ways to control this pest will be a long process.

"For any effort in which you want to control the nematode, this is a great resource," Baum said. "But having the genome is only one of many steps in the right direction. Albeit, a very big one!"


'/>"/>

Contact: Thomas Baum
tbaum@iastate.edu
515-294-2398
Iowa State University
Source:Eurekalert

Related biology news :

1. Researchers identify proteins involved in new neurodegenerative syndrome
2. Texas researchers and educators head for Antarctica
3. MGH researchers describe new way to identify, evolve novel enzymes
4. University of Pennsylvania researchers develop formula to gauge risk of disease clusters
5. U of MN researchers discover noninvasive diagnostic tool for brain diseases
6. U of Minnesota researchers discover noninvasive diagnostic tool for brain diseases
7. Researchers discover new strategies for antibiotic resistance
8. Researchers find new taste in fruit flies: carbonated water
9. Binghamton University researchers investigate evolving malaria resistance
10. UIC researchers find promising new targets for antibiotics
11. Researchers develop simple method to create natural drug products
Post Your Comments:
*Name:
*Comment:
*Email:
(Date:6/22/2016)... , June 22, 2016 On Monday, ... call to industry to share solutions for the Biometric ... U.S. Customs and Border Protection (CBP), explains that CBP ... are departing the United States , ... and to defeat imposters. Logo - ...
(Date:6/9/2016)... ISTANBUL , June 9, 2016  Perkotek an innovation leader in attendance control ... to seamlessly log work hours, for employers to make sure the right employees are ... Logo - http://photos.prnewswire.com/prnh/20160609/377486LOGO ... ... ...
(Date:6/2/2016)... 2, 2016   The Weather Company , an IBM ... an industry-first capability in which consumers will be able to ... ask questions via voice or text and receive relevant information ... Marketers have long sought an advertising solution that ... be personal, relevant and valuable; and can scale across millions ...
Breaking Biology News(10 mins):
(Date:6/23/2016)... HOUSTON , June 23, 2016 ... agreement with the Cy-Fair Sports Association to serve ... of the agreement, Houston Methodist Willowbrook will provide ... education and connectivity with association coaches, volunteers, athletes ... partner with the Cy-Fair Sports Association and to ...
(Date:6/23/2016)... Calif. , June 23, 2016  The Prostate Cancer Foundation ... increasingly precise treatments and faster cures for prostate cancer. Members of the Class ... across 15 countries. Read More About the Class of ... ... ...
(Date:6/23/2016)... June 23, 2016   EpiBiome , a precision ... million in debt financing from Silicon Valley Bank (SVB). ... and to advance its drug development efforts, as well ... "SVB has been an incredible strategic partner ... a traditional bank would provide," said Dr. Aeron ...
(Date:6/23/2016)... ... ... STACS DNA Inc., the sample tracking software company, today announced that Dr. Hays ... DNA as a Field Application Specialist. , “I am thrilled that Dr. Young ... DNA. “In further expanding our capacity as a scientific integrator, Hays brings a wealth ...
Breaking Biology Technology: