Navigation Links
From deadly E. coli to endangered polar bears: GigaScience provides first citable data
Date:7/6/2011

BioMed Central and BGI launch a new integrated database and journal, to meet the needs of a new generation of biological and biomedical research as it enters the era of "big-data."

GigaScience, an innovative new journal and integrated database to be launched by BioMed Central in November 2011, has released their first datasets to be given a Digital Object Identifier (DOI). This enables a long-needed way to properly recognize the data producers who have provided an untold number of essential resources to the entire research community. This not only promotes very rapid data release, but also provides easy access, reuse, tracking, and most importantly permanency for such datasets. The journal is being launched by a collaboration between BGI, the world's largest genomics institute, and open access publisher BioMed Central, a leader in scientific data sharing and open data.

The datasets, created by BGI and its collaborators in Germany and in the Genome10K project, include the sequence and assembly data from the recent deadly outbreak strain E. coli O104, and 7 large vertebrates, including the giant panda, which is in great danger of extinction; the chinese rhesus and crab-eating cynomolous macaques, which are commonly used biomedical animal models; the polar bear and the emperor and adelie penguins, which live in extremely hostile environments; and the domestic pigeon, which has unusually accurate navigation abilities. The datasets have been assigned Digital Object Identifiers (DOIs) to enable other scientists to cite the datasets, in the same manner as scientific papers.

GigaScience has been working with the DataCite organization and the British Library to enable datasets to be given DOIs. A primary goal for creating dataset DOIs is to promote extremely rapid data release and dissemination. And, in keeping with this, the majority of the above datasets are available prior to the publication of their associated scientific journal articles. Given that such publication is currently the only effective means for data producers to obtain credit for their work, this normally creates extensive delays in data availability due to the long writing, reviewing, and editing processes needed for article publication. This can seriously impede the speed at which scientific discoveries are made.

The importance of free and faster methods of data release was made particularly clear in the recent deadly E. coli outbreak in Europe. To aid the fight against the outbreak, BGI and their collaborators at the University Medical Centre Hamburg-Eppendorf rapidly sequenced the pathogen's genome and immediately released the data. In conjunction with publicizing the rapid release through Twitter, the entire scientific community began to "crowdsource" the data with little to no delay between data production and release. These data were also released without restrictions on its use, under a public domain license. This, in conjunction with having a DOI, marks the first time a genome has been released in this way. Additionally, the growing team of researchers utilizing and adding invaluable information to the pool of data have now confirmed they will also release their work in the same manner.

Speaking of the announcement, Iain Hrynaszkiewicz, Journal Publisher with BioMed Central said: "All the articles published by GigaScience will be freely available for readers and all the data open and reproducible for researchers. An online journal and integrated database enhances the functionality and reliability of the scientific literature and demonstrates real leadership in openness in science. BioMed Central believes open access should include, wherever possible, data as well as papers, and we're delighted to be working with BGI to make data a truly first-class citizen in publishing."


'/>"/>

Contact: Matt McKay
matthew.mckay@biomedcentral.com
44-020-319-22216
BioMed Central
Source:Eurekalert

Related biology news :

1. Deadly rugby virus spreads in sumo wrestlers
2. 15-state Southern obesity summit to focus on deadly epidemic
3. Battling bacteria in the blood: Researchers tackle deadly infections
4. Study: Excessive use of antiviral drugs could aid deadly flu
5. Scientists discover how deadly fungus protects itself
6. University of Kansas graduate student researcher takes aim at deadly brain tumors
7. UNC study: Scientists identify chemical compound that may stop deadly brain tumors
8. Minimizing the spread of deadly Hendra virus
9. TGen researchers discover possible way to block the spread of deadly brain tumors
10. FluChip technology licensed to combat deadly flu virus
11. Scientists learn why the flu may turn deadly
Post Your Comments:
*Name:
*Comment:
*Email:
(Date:3/31/2016)... , March 31, 2016 ... ) ("LegacyXChange" or the "Company") LegacyXChange is ... users of its soon to be launched online site ... https://www.youtube.com/channel/UCyTLBzmZogV1y2D6bDkBX5g ) will also provide potential shareholders ... of DNA technology to an industry that is notorious ...
(Date:3/29/2016)... 2016 LegacyXChange, Inc. (OTC: ... SelectaDNA/CSI Protect are pleased to announce our successful effort ... variety of writing instruments, ensuring athletes signatures against counterfeiting ... from athletes on LegacyXChange will be assured of ongoing ... Bill Bollander , CEO states, "By ...
(Date:3/22/2016)... , March 22, 2016 ... research report "Electronic Sensors Market for Consumer Industry by ... & Others), Application (Communication & IT, Entertainment, ... - Global Forecast to 2022", published by ... is expected to reach USD 26.76 Billion ...
Breaking Biology News(10 mins):
(Date:6/23/2016)... (PRWEB) , ... June 23, 2016 , ... ... Plate® YM (Yeast and Mold) microbial test has received AOAC Research Institute approval ... of microbial tests introduced last year,” stated Bob Salter, Vice President of Regulatory ...
(Date:6/23/2016)... (PRWEB) , ... June 23, 2016 , ... STACS DNA ... Technical Leader at the Arkansas State Crime Laboratory, has joined STACS DNA as a ... STACS DNA team,” said Jocelyn Tremblay, President and COO of STACS DNA. β€œIn further ...
(Date:6/23/2016)... June 23, 2016 On Wednesday, June ... 4,833.32, down 0.22%; the Dow Jones Industrial Average edged 0.27% ... at 2,085.45, down 0.17%. Stock-Callers.com has initiated coverage on the ... Nektar Therapeutics (NASDAQ: NKTR ), Aralez Pharmaceuticals Inc. ... BIND ). Learn more about these stocks by ...
(Date:6/23/2016)... ReportsnReports.com adds 2016 global ... pharmaceuticals section with historic and forecast data along ... Complete report on the Cell Culture ... companies and supported with 261 tables and figures ... The Global Cell Culture Media Industry ...
Breaking Biology Technology: