Navigation Links
FEBS Letters Structured Digital Abstracts experiment
Date:4/2/2008

Amsterdam, 2 April 2008 - FEBS Letters, one of the leading journals for short reports in molecular biosciences, announced today an exciting new enhancement to the journal article: Structured Digital Abstracts (SDA).

A Structured Digital Abstract in FEBS Letters is an extension of the regular journal article abstract comprising of a series of sentences each of which contains a relationship between two biological entities, mentioning the method used to study the relationship. Each sentence is preceded by one or more identifiers pointing to the corresponding database entries that contain the full details of the interaction. To provide a simplified example of a potential relationship: protein A interacts with protein B, by method X.

A Special Issue of FEBS Letters, Volume 582/8 (9 April) marks the launch of Structured Digital Abstracts and explains the experiment and relevance in full detail.

The aim of the experiment is threefold:

  • To develop and fine tune simple tools to facilitate data entries and the authors selection of terms from controlled vocabularies.

  • To propose a text layout for a structured abstract to be appended to the traditional abstract.

  • To investigate and estimate the authors degree of interest (and competence) in a project implicating them as active players in this editorial revolution.

This innovative experiment is a joint project between the curators of the MINT Molecular Interactions database in Rome, the FEBS Letters Editorial Office in Heidelberg, and leading global experts in text- mining and bioinformatics.

As Gianni Cesareni, Editor of FEBS Letters (http://www.elsevier.com/locate/febslet) and in charge of the MINT database explains: Many articles in biological journals describe relationships between entities (genes, proteins, etc.) yet this information cannot be efficiently used because of difficulties in retrieving from text. Databases capture this valuable information and organize it in a structured format ready for automatic analysis. The experiment of using SDAs will facilitate database entry and improve disclosure, to the benefit of authors and readers.

In the FEBS Letters special issue (http://www.sciencedirect.com/science/issue/4938-2008-994179991-684107) Florian Leitner and Alfonso Valencia propose that a combination of human expertise and automatic text-mining systems can be used to create a first generation of electronically annotated information that can be added to journal abstracts and that is directly related to the information in the corresponding text.


'/>"/>

Contact: Adriaan Klinkenberg
f.klinkenberg@elsevier.com
31-204-852-456
Elsevier
Source:Eurekalert

Related biology news :

1. Another type of nanotube, a how-to guide to making bamboo-structured carbon nanotubes
2. Book is the first high-resolution digital mouse brain atlas designed for Web applications
3. Entrust Digital Signatures Help Secure More Than 18 Million U.S. ePassports
4. Experimental Biology and Medicine announces expansion into Asia, opens new office
5. Translational research patented first experimental treatment against idiopathic pulmonary fibrosis
6. Experimental Biology 2008 meets in San Diego April 5-9
7. A unique experiment with chlorine -- and a new way of teaching
Post Your Comments:
*Name:
*Comment:
*Email:
(Date:4/5/2017)... 2017 KEY FINDINGS The global ... a CAGR of 25.76% during the forecast period of ... factor for the growth of the stem cell market. ... MARKET INSIGHTS The global stem cell market is ... geography. The stem cell market of the product is ...
(Date:3/30/2017)... 2017  On April 6-7, 2017, Sequencing.com will host ... hackathon at Microsoft,s headquarters in Redmond, ... on developing health and wellness apps that provide a ... Genome is the first hackathon for personal genomics ... companies in the genomics, tech and health industries are ...
(Date:3/29/2017)... 2017  higi, the health IT company that operates ... America , today announced a Series B investment ... EveryMove. The new investment and acquisition accelerates higi,s strategy ... transform population health activities through the collection and workflow ... higi collects and secures data today on behalf of ...
Breaking Biology News(10 mins):
(Date:10/10/2017)... (PRWEB) , ... October 10, ... ... development-stage cancer-focused pharmaceutical company advancing targeted antibody-drug conjugate (ADC) therapeutics, today confirmed ... targeted HPLN (Hybrid Polymerized Liposomal Nanoparticle), a technology developed in collaboration with ...
(Date:10/10/2017)... 2017 International research firm Parks Associates announced today ... the TMA 2017 Annual Meeting , October 11 in ... home security market and how smart safety and security products impact the ... Parks Associates: Smart Home Devices: ... "The residential security market has experienced ...
(Date:10/10/2017)... ... October 10, 2017 , ... The Pittcon ... awards honoring scientists who have made outstanding contributions to analytical chemistry ... Pittcon 2018, the world’s leading conference and exposition for laboratory science, which will ...
(Date:10/9/2017)... N.C. (PRWEB) , ... October 09, 2017 , ... At ... announced Dr. Christopher Stubbs, a professor in Harvard University’s Departments of Physics and Astronomy, ... Stubbs was a member of the winning team for the 2015 Breakthrough Prize in ...
Breaking Biology Technology: