Navigation Links
Amber MD Workshop 2011 -- May 3-6, Barcelona
Date:3/23/2011

We are glad to announce the Amber Workshop 2011 that will be held in Barcelona from the 3rd to 6th May. The course will be taught by Ross C. Walker and Adrian E. Roitberg and will be hosted by the IRB Barcelona and the Barcelona supercomputing Center.

Program

Classes will be held from Tuesday 3rd to Friday 6th of May, starting at 9:00 AM to 6:00 PM, with breaks for lunch and coffee.

List of covered topics:

  1. Introduction to force fields and molecular dynamics (Lecture)
  2. Overview of AMBER and it's programs (Lecture)
  3. Introduction to setting up and running simulations (Lecture / Hands on)
  4. Visualizing AMBER simulations (Hands on)
  5. Overview of AMBER Force Fiels / Solvent Models etc. (Lecture)
  6. Introduction to implicit solvent and binding energy calculations (Lecture)
  7. Protein folding and advanced analysis (Hands on)
  8. Simulating Sugars and the Glycam Force Field (Lecture / Hands on)
  9. Designing good simulation projects (Lecture)
  10. Dealing with non-standard residues (Lecture / Hands on)
  11. What to do if there is no crystal structure (Lecture)
  12. Statistical mechanics for free energy calculations [Thermodynamic Integration] (Lecture / Hands on)
  13. QM/MM coupled potential simulations (Lecture)
  14. GPU accelerated MD (Lecture)

Attendees

Attendees consist of Graduate students and postdocs as well as few faculty members interested in learning about Molecular Dynamics techniques.

The number is limited by the availability of hardware for the hands-on tutorials.

These require each student to have access to a desktop running Linux. Student number is limited to 40.

Registration

Given the limited number of seats you will be requested to fill a pre-registration form before the 1st of April: http://mmb.irbbarcelona.org/amber2011/regis.htm

Registration fee is 90 Euros and includes:

  • USB flash drive with training materials
  • Temporal access to remote computing resources
  • Coffee breaks
  • Certificate of attendance


'/>"/>

Contact: Meritxell Gavalda
meritxell.gavalda@irbbarcelona.org
Institute for Research in Biomedicine (IRB Barcelona)
Source:Eurekalert

Related biology news :

1. Mating mites trapped in amber reveal sex role reversal
2. LiXEdrom: Innovative measuring chamber for X-ray study of liquid jets
3. International team of scientists describe first Cretaceous African amber deposit
4. Concordia University to build innovative Environmental Chamber
5. Diuscovery in amber reveals ancient biology of termites
6. Ecology of microbes focus of workshop
7. Wasting disease in cattle focus of workshop
8. IEEE-USA workshop to explore the challenges and opportunities of electric vehicle technology
9. Malaria modeling and control focus of workshop
10. Body weight regulation and metabolism focus of workshop
11. STEM workshop set to advance women, minorities
Post Your Comments:
*Name:
*Comment:
*Email:
(Date:5/3/2016)... 2016  Neurotechnology, a provider of high-precision biometric ... Biometric Identification System (ABIS) , a complete system ... ABIS can process multiple complex biometric transactions with ... fingerprint, face or iris biometrics. It leverages the ... MegaMatcher Accelerator , which have been used ...
(Date:4/26/2016)... and LONDON , April 26, ... of EdgeVerve Systems, a product subsidiary of Infosys ... announced a partnership to integrate the Onegini mobile ...      (Logo: http://photos.prnewswire.com/prnh/20151104/283829LOGO ) ... customers enhanced security to access and transact across ...
(Date:4/15/2016)...  A new partnership announced today will help ... in a fraction of the time it takes ... life insurance policies to consumers without requiring inconvenient ... Diagnostics, rapid testing (A1C, Cotinine and HIV) and ... weight, pulse, BMI, and activity data) available at ...
Breaking Biology News(10 mins):
(Date:5/24/2016)... ... May 24, 2016 , ... Media Cybernetics, global ... Media Cybernetics corporate branding reflects a results-driven revitalization for a company with a ... re-branding components include a crisp, refreshed logo and a new web presence. , ...
(Date:5/23/2016)... , ... May 23, 2016 , ... ... Will Drive Precision Farming in 2017 and Beyond. The paper outlines the key ... the precision ag industry. , “We’ve witnessed a lot of highs and lows ...
(Date:5/23/2016)... , May 23, 2016 Oxitec CEO ... th at 10:15 a.m. ET before the United States ... genetically engineered mosquitos can play in controlling the spread of ... the Zika virus.      (Logo: http://photos.prnewswire.com/prnh/20150630/227348 ... mosquito with a self-limiting gene. Trials in Brazil ...
(Date:5/23/2016)... Springs, North Carolina (PRWEB) , ... May 23, ... ... process automation and building management solutions and services based in Aurora, Ohio, has ... decade of established business in the Research Triangle Park area, this new location ...
Breaking Biology Technology: