Navigation Links
Amber MD Workshop 2011 -- May 3-6, Barcelona
Date:3/23/2011

We are glad to announce the Amber Workshop 2011 that will be held in Barcelona from the 3rd to 6th May. The course will be taught by Ross C. Walker and Adrian E. Roitberg and will be hosted by the IRB Barcelona and the Barcelona supercomputing Center.

Program

Classes will be held from Tuesday 3rd to Friday 6th of May, starting at 9:00 AM to 6:00 PM, with breaks for lunch and coffee.

List of covered topics:

  1. Introduction to force fields and molecular dynamics (Lecture)
  2. Overview of AMBER and it's programs (Lecture)
  3. Introduction to setting up and running simulations (Lecture / Hands on)
  4. Visualizing AMBER simulations (Hands on)
  5. Overview of AMBER Force Fiels / Solvent Models etc. (Lecture)
  6. Introduction to implicit solvent and binding energy calculations (Lecture)
  7. Protein folding and advanced analysis (Hands on)
  8. Simulating Sugars and the Glycam Force Field (Lecture / Hands on)
  9. Designing good simulation projects (Lecture)
  10. Dealing with non-standard residues (Lecture / Hands on)
  11. What to do if there is no crystal structure (Lecture)
  12. Statistical mechanics for free energy calculations [Thermodynamic Integration] (Lecture / Hands on)
  13. QM/MM coupled potential simulations (Lecture)
  14. GPU accelerated MD (Lecture)

Attendees

Attendees consist of Graduate students and postdocs as well as few faculty members interested in learning about Molecular Dynamics techniques.

The number is limited by the availability of hardware for the hands-on tutorials.

These require each student to have access to a desktop running Linux. Student number is limited to 40.

Registration

Given the limited number of seats you will be requested to fill a pre-registration form before the 1st of April: http://mmb.irbbarcelona.org/amber2011/regis.htm

Registration fee is 90 Euros and includes:

  • USB flash drive with training materials
  • Temporal access to remote computing resources
  • Coffee breaks
  • Certificate of attendance


'/>"/>

Contact: Meritxell Gavalda
meritxell.gavalda@irbbarcelona.org
Institute for Research in Biomedicine (IRB Barcelona)
Source:Eurekalert

Related biology news :

1. Mating mites trapped in amber reveal sex role reversal
2. LiXEdrom: Innovative measuring chamber for X-ray study of liquid jets
3. International team of scientists describe first Cretaceous African amber deposit
4. Concordia University to build innovative Environmental Chamber
5. Diuscovery in amber reveals ancient biology of termites
6. Ecology of microbes focus of workshop
7. Wasting disease in cattle focus of workshop
8. IEEE-USA workshop to explore the challenges and opportunities of electric vehicle technology
9. Malaria modeling and control focus of workshop
10. Body weight regulation and metabolism focus of workshop
11. STEM workshop set to advance women, minorities
Post Your Comments:
*Name:
*Comment:
*Email:
(Date:3/28/2017)... , March 28, 2017 The ... Hardware (Camera, Monitors, Servers, Storage Devices), Software (Video Analytics, ... Region - Global Forecast to 2022", published by MarketsandMarkets, ... 2016 and is projected to reach USD 75.64 Billion ... and 2022. The base year considered for the study ...
(Date:3/24/2017)... 24, 2017 The Controller General of Immigration from ... Abdulla Algeen have received the prestigious international IAIR Award for the ... Continue Reading ... ... Controller Abdulla Algeen (small picture on the right) have received the IAIR ...
(Date:3/23/2017)... The report "Gesture Recognition and Touchless Sensing Market by Technology (Touch-based ... to 2022", published by MarketsandMarkets, the market is expected to be worth USD ... 2022. Continue Reading ... ... ...
Breaking Biology News(10 mins):
(Date:10/11/2017)... and LAGUNA HILLS, Calif. , Oct. ... Cancer Research, London (ICR) and University ... SKY92, SkylineDx,s prognostic tool to risk-stratify patients with multiple myeloma ... MUK nine . The University of Leeds ... partly funded by Myeloma UK, and ICR will perform the ...
(Date:10/10/2017)... ... 2017 , ... San Diego-based team building and cooking events company, Lajollacooks4u, has ... The bold new look is part of a transformation to increase awareness, appeal to ... period. , It will also expand its service offering from its signature gourmet cooking ...
(Date:10/10/2017)... 10, 2017 International research firm Parks Associates announced ... at the TMA 2017 Annual Meeting , October 11 in ... residential home security market and how smart safety and security products impact ... Parks Associates: Smart Home ... "The residential security market has ...
(Date:10/9/2017)... DIEGO , Oct. 9, 2017  BioTech ... biological mechanism by which its ProCell stem cell ... critical limb ischemia.  The Company, demonstrated that treatment ... amount of limbs saved as compared to standard ... the molecule HGF resulted in reduction of therapeutic ...
Breaking Biology Technology: