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Secondary Structure


In biochemistry and structural biology, secondary structure is the general three-dimensional form of local segments of biopolymers such as proteins and nucleic acids (DNA/RNA). It does not, however, describe specific atomic...
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The functional form of single stranded RNA molecules frequently requires a specific tertiary structure. The scaffold for this structure is provided by secondary structural elements which are hydrogen bonds within the...
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This 1996-1997 Protein Secondary Structure tutorial works ONLY with Netscape ... Further Resources on Protein Secondary Structure ...
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PROTEIN SECONDARY STRUCTURE ... Running a secondary structure prediction on a newly-determined sequence just ... for secondary structure predictions include: ...
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A third type of secondary structure involves three strands of protein bonded ... But whatever the secondary structure happens to be, the side groups are going to ...
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Secondary Structure is the local structure which is typically ... With protein secondary structure, regularly spaced intrachain hydrogen bonding is seen. ...
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Secondary structure elements are observed to combine in specific geometric ... look at motifs consisting of no more than three secondary structure elements. ...
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Amino acid preferences for different secondary structure: Alpha helix may be considered the default state for secondary structure. ...
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CLC bio offers a wide range of world class bioinformatics solutions: From highly advanced sequence ... Graphical view and editing of secondary structure ...
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Secondary Structure ... Regular secondary structure conformations in segments of a polypeptide chain ... like the alpha-helix, a repeating secondary structure. ...
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Secondary structure can be determined by CD spectroscopy in the "far-uv" ... The approximate fraction of each secondary structure type that is present in any ...
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Secondary structure prediction has been around for almost a quarter of a century. ... An early problem in secondary structure prediction had been the inclusion of ...
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Secondary structure may be defined as the local spatial organization of the ... The secondary structure is defined by four basic categories: a helix, b strand ...
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Nucleic acids also have secondary structure, most notably single-stranded RNA molecules. ... to predict RNA secondary structure typically use dynamic ...
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The secondary structure of a protein describes certain repetitive, local ... There are two major forms of secondary structure that are found in almost all ...
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Secondary structure predictions have been used in fold recognition (discussed ... The secondary structure of a particular residue is partly determined by its ...
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Fast algorithm for predicting the secondary structure of single-stranded RNA. ... A statistical sampling algorithm for RNA secondary structure prediction. ...
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